Aliases for PAFAH1B2P1 Gene

Aliases for PAFAH1B2P1 Gene

  • PAFAH1B2 Pseudogene 1 2 3 5
  • Platelet-Activating Factor Acetylhydrolase 1b, Catalytic Subunit 2 (30kDa) Pseudogene 3
  • Platelet Activating Factor Acetylhydrolase 1b Catalytic Subunit 2 Pseudogene 3
  • PAFAH1B2P1 5

External Ids for PAFAH1B2P1 Gene

Summaries for PAFAH1B2P1 Gene

GeneCards Summary for PAFAH1B2P1 Gene

PAFAH1B2P1 (PAFAH1B2 Pseudogene 1) is a Pseudogene.

Additional gene information for PAFAH1B2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PAFAH1B2P1 Gene

Genomics for PAFAH1B2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PAFAH1B2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ025028 Enhancer 0.3 Ensembl 250.7 -0.3 -313 1 RFX5 FOS PAFAH1B2P1 HSALNG0137090 ARX
GH0XJ025023 Enhancer 0.2 Ensembl 0.7 -3.2 -3212 1.6 HSALNG0137090 PAFAH1B2P1 ARX lnc-POLA1-8
GH0XJ025024 Enhancer 0.2 Ensembl 0.4 -5.9 -5912 0.2 HSALNG0137090 lnc-POLA1-8 ARX PAFAH1B2P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PAFAH1B2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PAFAH1B2P1 Gene

Latest Assembly
chrX:25,029,413-25,030,235
(GRCh38/hg38)
Size:
823 bases
Orientation:
Plus strand

Previous Assembly
chrX:25,047,530-25,048,093
(GRCh37/hg19 by Entrez Gene)
Size:
564 bases
Orientation:
Plus strand

chrX:25,047,662-25,048,352
(GRCh37/hg19 by Ensembl)
Size:
691 bases
Orientation:
Plus strand

Genomic View for PAFAH1B2P1 Gene

Genes around PAFAH1B2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PAFAH1B2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PAFAH1B2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PAFAH1B2P1 Gene

Proteins for PAFAH1B2P1 Gene

Post-translational modifications for PAFAH1B2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PAFAH1B2P1 Gene

Domains & Families for PAFAH1B2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PAFAH1B2P1 Gene

Function for PAFAH1B2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PAFAH1B2P1 Gene

Localization for PAFAH1B2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PAFAH1B2P1 Gene

Pathways & Interactions for PAFAH1B2P1 Gene

PathCards logo

SuperPathways for PAFAH1B2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PAFAH1B2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PAFAH1B2P1 Gene

Drugs & Compounds for PAFAH1B2P1 Gene

No Compound Related Data Available

Transcripts for PAFAH1B2P1 Gene

mRNA/cDNA for PAFAH1B2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PAFAH1B2P1 Gene

No ASD Table

Relevant External Links for PAFAH1B2P1 Gene

GeneLoc Exon Structure for
PAFAH1B2P1

Expression for PAFAH1B2P1 Gene

No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PAFAH1B2P1 Gene

Orthologs for PAFAH1B2P1 Gene

Evolution for PAFAH1B2P1 Gene

ENSEMBL:
Gene Tree for PAFAH1B2P1 (if available)
TreeFam:
Gene Tree for PAFAH1B2P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for PAFAH1B2P1

No data available for Orthologs for PAFAH1B2P1 Gene

Paralogs for PAFAH1B2P1 Gene

No data available for Paralogs for PAFAH1B2P1 Gene

Variants for PAFAH1B2P1 Gene

Additional Variant Information for PAFAH1B2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PAFAH1B2P1
Leiden Open Variation Database (LOVD)
PAFAH1B2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PAFAH1B2P1 Gene

Disorders for PAFAH1B2P1 Gene

No disorders were found for PAFAH1B2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PAFAH1B2P1 Gene

Publications for PAFAH1B2P1 Gene

No publications were found for PAFAH1B2P1 Gene.

No data available for Mastermind for PAFAH1B2P1 Gene

Products for PAFAH1B2P1 Gene

Sources for PAFAH1B2P1 Gene