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Aliases for PABPC1P2 Gene

Aliases for PABPC1P2 Gene

  • Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 2 2 3 5
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 2 2 3
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 4 2 3
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 2 2
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 4 2
  • PABPCP2 3
  • PABPCP4 3
  • PABP2 3
  • PABP4 3

External Ids for PABPC1P2 Gene

Previous HGNC Symbols for PABPC1P2 Gene

  • PABPCP4
  • PABPCP2

Previous GeneCards Identifiers for PABPC1P2 Gene

  • GC02P147344
  • GC02P139340

Summaries for PABPC1P2 Gene

GeneCards Summary for PABPC1P2 Gene

PABPC1P2 (Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 2) is a Pseudogene.

Additional gene information for PABPC1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PABPC1P2 Gene

Genomics for PABPC1P2 Gene

GeneHancer (GH) Regulatory Elements for PABPC1P2 Gene

Promoters and enhancers for PABPC1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J146576 Enhancer 0.6 VISTA UCNEbase 0.4 -10.3 -10256 1.2 PABPC1P2 GC02P146551
GH02J146579 Enhancer 0.6 ENCODE 0.4 -7.7 -7689 0.2 STAT1 PKNOX1 JUN CEBPB REST EP300 JUND STAT3 FOSL2 PABPC1P2 GC02P146551
GH02J146591 Enhancer 0.6 UCNEbase 0.4 +5.0 5035 0.4 PKNOX1 POLR2A GC02M146591 PABPC1P2
GH02J146580 Enhancer 0.5 ENCODE 0.4 -7.3 -7329 0.2 SP1 FOXA2 TEAD1 REST PABPC1P2 GC02P146551
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PABPC1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PABPC1P2 Gene

Genomic Locations for PABPC1P2 Gene
chr2:146,587,057-146,590,990
(GRCh38/hg38)
Size:
3,934 bases
Orientation:
Plus strand
chr2:147,344,625-147,348,558
(GRCh37/hg19)

Genomic View for PABPC1P2 Gene

Genes around PABPC1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PABPC1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PABPC1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PABPC1P2 Gene

Proteins for PABPC1P2 Gene

Post-translational modifications for PABPC1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PABPC1P2 Gene

Domains & Families for PABPC1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PABPC1P2 Gene

Function for PABPC1P2 Gene

Phenotypes From GWAS Catalog for PABPC1P2 Gene

Phenotypes for PABPC1P2 Gene

genes like me logo Genes that share phenotypes with PABPC1P2: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PABPC1P2 Gene

Localization for PABPC1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PABPC1P2 Gene

Pathways & Interactions for PABPC1P2 Gene

SuperPathways for PABPC1P2 Gene

No Data Available

Interacting Proteins for PABPC1P2 Gene

Gene Ontology (GO) - Biological Process for PABPC1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PABPC1P2 Gene

Drugs & Compounds for PABPC1P2 Gene

No Compound Related Data Available

Transcripts for PABPC1P2 Gene

mRNA/cDNA for PABPC1P2 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PABPC1P2 Gene

Poly(A) binding protein, cytoplasmic 1 pseudogene 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PABPC1P2 Gene

No ASD Table

Relevant External Links for PABPC1P2 Gene

GeneLoc Exon Structure for
PABPC1P2
ECgene alternative splicing isoforms for
PABPC1P2

Expression for PABPC1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PABPC1P2 Gene

mRNA differential expression in normal tissues according to GTEx for PABPC1P2 Gene

This gene is overexpressed in Testis (x51.1).

NURSA nuclear receptor signaling pathways regulating expression of PABPC1P2 Gene:

PABPC1P2

SOURCE GeneReport for Unigene cluster for PABPC1P2 Gene:

Hs.334462
genes like me logo Genes that share expression patterns with PABPC1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PABPC1P2 Gene

Orthologs for PABPC1P2 Gene

Evolution for PABPC1P2 Gene

ENSEMBL:
Gene Tree for PABPC1P2 (if available)
TreeFam:
Gene Tree for PABPC1P2 (if available)

No data available for Orthologs for PABPC1P2 Gene

Paralogs for PABPC1P2 Gene

No data available for Paralogs for PABPC1P2 Gene

Variants for PABPC1P2 Gene

Sequence variations from dbSNP and Humsavar for PABPC1P2 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000852493 -- 146,590,469(+) A/T non_coding_transcript_variant
rs1001095263 -- 146,590,689(+) C/A non_coding_transcript_variant
rs1001205470 -- 146,589,873(+) T/A non_coding_transcript_variant
rs1001264444 -- 146,587,293(+) C/T non_coding_transcript_variant
rs1002273251 -- 146,585,951(+) C/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for PABPC1P2 Gene

Variant ID Type Subtype PubMed ID
nsv834403 CNV gain 17160897

Additional Variant Information for PABPC1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PABPC1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for PABPC1P2 Gene

Disorders for PABPC1P2 Gene

Additional Disease Information for PABPC1P2

No disorders were found for PABPC1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PABPC1P2 Gene

Publications for PABPC1P2 Gene

  1. Chromosomal localization of three human poly(A)-binding protein genes and four related pseudogenes. (PMID: 10543404) Féral C … Guellaën G (Human genetics 1999) 2 3 58
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber MJ … Krauss RM (PloS one 2010) 44 58
  3. Common genetic variation and the control of HIV-1 in humans. (PMID: 20041166) Fellay J … NIAID Center for HIV/AIDS Vaccine Immunology (CHAVI) (PLoS genetics 2009) 44 58
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58
  5. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 44 58

Products for PABPC1P2 Gene

Sources for PABPC1P2 Gene

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