Aliases for PABPC1P2 Gene

Aliases for PABPC1P2 Gene

  • Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 2 2 3 5
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 4 2 3
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 2 2 3
  • PABP2 2 3
  • PABP4 2 3
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 2 2
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 4 2
  • PABPC1P2 5
  • PABPCP2 3
  • PABPCP4 3

External Ids for PABPC1P2 Gene

Previous HGNC Symbols for PABPC1P2 Gene

  • PABPCP4
  • PABPCP2

Previous GeneCards Identifiers for PABPC1P2 Gene

  • GC02P147344
  • GC02P139340

Summaries for PABPC1P2 Gene

GeneCards Summary for PABPC1P2 Gene

PABPC1P2 (Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 2) is a Pseudogene. Diseases associated with PABPC1P2 include Oculopharyngeal Muscular Dystrophy.

Additional gene information for PABPC1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PABPC1P2 Gene

Genomics for PABPC1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PABPC1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J146591 Enhancer 0.5 UCNEbase 0.4 +5.0 5035 0.4 POLR2A PKNOX1 lnc-ACVR2A-9 PABPC1P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PABPC1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PABPC1P2 Gene

Genomic Locations for PABPC1P2 Gene
chr2:146,587,057-146,590,990
(GRCh38/hg38)
Size:
3,934 bases
Orientation:
Plus strand
chr2:147,344,625-147,348,558
(GRCh37/hg19)
Size:
3,934 bases
Orientation:
Plus strand

Genomic View for PABPC1P2 Gene

Genes around PABPC1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PABPC1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PABPC1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PABPC1P2 Gene

Proteins for PABPC1P2 Gene

Post-translational modifications for PABPC1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PABPC1P2 Gene

Domains & Families for PABPC1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PABPC1P2 Gene

Function for PABPC1P2 Gene

Phenotypes From GWAS Catalog for PABPC1P2 Gene

Phenotypes for PABPC1P2 Gene

GenomeRNAi human phenotypes for PABPC1P2:
genes like me logo Genes that share phenotypes with PABPC1P2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PABPC1P2 Gene

Localization for PABPC1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PABPC1P2 Gene

Pathways & Interactions for PABPC1P2 Gene

PathCards logo

SuperPathways for PABPC1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PABPC1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PABPC1P2 Gene

Drugs & Compounds for PABPC1P2 Gene

No Compound Related Data Available

Transcripts for PABPC1P2 Gene

mRNA/cDNA for PABPC1P2 Gene

4 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PABPC1P2 Gene

No ASD Table

Relevant External Links for PABPC1P2 Gene

GeneLoc Exon Structure for
PABPC1P2

Expression for PABPC1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PABPC1P2 Gene

mRNA differential expression in normal tissues according to GTEx for PABPC1P2 Gene

This gene is overexpressed in Testis (x51.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PABPC1P2

SOURCE GeneReport for Unigene cluster for PABPC1P2 Gene:

Hs.334462
genes like me logo Genes that share expression patterns with PABPC1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PABPC1P2 Gene

Orthologs for PABPC1P2 Gene

Evolution for PABPC1P2 Gene

ENSEMBL:
Gene Tree for PABPC1P2 (if available)
TreeFam:
Gene Tree for PABPC1P2 (if available)

No data available for Orthologs for PABPC1P2 Gene

Paralogs for PABPC1P2 Gene

No data available for Paralogs for PABPC1P2 Gene

Variants for PABPC1P2 Gene

Structural Variations from Database of Genomic Variants (DGV) for PABPC1P2 Gene

Variant ID Type Subtype PubMed ID
nsv834403 CNV gain 17160897

Additional Variant Information for PABPC1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PABPC1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for PABPC1P2 Gene

Disorders for PABPC1P2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for PABPC1P2 Gene - From: GeneCards

Disorder Aliases PubMed IDs
oculopharyngeal muscular dystrophy
  • opmd
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for PABPC1P2

genes like me logo Genes that share disorders with PABPC1P2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for PABPC1P2 Gene

Publications for PABPC1P2 Gene

  1. Chromosomal localization of three human poly(A)-binding protein genes and four related pseudogenes. (PMID: 10543404) Féral C … Guellaën G (Human genetics 1999) 2 3
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber MJ … Krauss RM (PloS one 2010) 41
  3. Common genetic variation and the control of HIV-1 in humans. (PMID: 20041166) Fellay J … NIAID Center for HIV/AIDS Vaccine Immunology (CHAVI) (PLoS genetics 2009) 41
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 41
  5. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 41

Products for PABPC1P2 Gene

Sources for PABPC1P2 Gene