Aliases for PABPC1P10 Gene

Aliases for PABPC1P10 Gene

  • Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 10 2 3 5
  • Poly(A) Binding Protein-Like 1 2 3
  • Poly(A)-Binding Protein-Like 1 2
  • D3S3192 3
  • PABPL1 3
  • PAB1 3

External Ids for PABPC1P10 Gene

Previous HGNC Symbols for PABPC1P10 Gene

  • PABPL1

Previous GeneCards Identifiers for PABPC1P10 Gene

  • GC03U901386
  • GC03M152421
  • GC03M155028

Summaries for PABPC1P10 Gene

GeneCards Summary for PABPC1P10 Gene

PABPC1P10 (Poly(A) Binding Protein Cytoplasmic 1 Pseudogene 10) is a Pseudogene.

Additional gene information for PABPC1P10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PABPC1P10 Gene

Genomics for PABPC1P10 Gene

GeneHancer (GH) Regulatory Elements for PABPC1P10 Gene

Promoters and enhancers for PABPC1P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J155309 Promoter 0.5 Ensembl 500.7 -0.1 -94 0.6 CHAMP1 ZBTB33 PABPC1P10 lnc-PLCH1-4 STRIT1 LOC105374172
GH03J155308 Enhancer 0.4 Ensembl 500.7 +0.8 806 0.4 FOS JUND CEBPB PABPC1P10 lnc-PLCH1-4 lnc-PLCH1-1
GH03J155302 Enhancer 0.8 Ensembl ENCODE 0.4 +6.4 6448 2 FOS ZNF316 NFIC FOSL2 PBX2 NFE2 MEIS2 SOX5 HDGF MAFK STRIT1 PABPC1P10 lnc-PLCH1-1 lnc-PLCH1-4
GH03J155312 Enhancer 0.3 Ensembl 0.7 -3.4 -3437 0.9 CEBPB ATF4 LOC105374172 PABPC1P10 lnc-PLCH1-4
GH03J155313 Enhancer 0.2 Ensembl 0.7 -2.5 -2494 0.2 LOC105374172 PABPC1P10 lnc-PLCH1-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PABPC1P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PABPC1P10 Gene

Genomic Locations for PABPC1P10 Gene
chr3:155,309,427-155,309,807
(GRCh38/hg38)
Size:
381 bases
Orientation:
Minus strand
chr3:155,027,216-155,027,596
(GRCh37/hg19)
Size:
381 bases
Orientation:
Minus strand

Genomic View for PABPC1P10 Gene

Genes around PABPC1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PABPC1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PABPC1P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PABPC1P10 Gene

Proteins for PABPC1P10 Gene

Post-translational modifications for PABPC1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PABPC1P10 Gene

Domains & Families for PABPC1P10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PABPC1P10 Gene

Function for PABPC1P10 Gene

Phenotypes From GWAS Catalog for PABPC1P10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PABPC1P10 Gene

Localization for PABPC1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PABPC1P10 Gene

Pathways & Interactions for PABPC1P10 Gene

PathCards logo

SuperPathways for PABPC1P10 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PABPC1P10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PABPC1P10 Gene

Drugs & Compounds for PABPC1P10 Gene

No Compound Related Data Available

Transcripts for PABPC1P10 Gene

mRNA/cDNA for PABPC1P10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PABPC1P10 Gene

No ASD Table

Relevant External Links for PABPC1P10 Gene

GeneLoc Exon Structure for
PABPC1P10

Expression for PABPC1P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PABPC1P10 Gene

genes like me logo Genes that share expression patterns with PABPC1P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PABPC1P10 Gene

Orthologs for PABPC1P10 Gene

Evolution for PABPC1P10 Gene

ENSEMBL:
Gene Tree for PABPC1P10 (if available)
TreeFam:
Gene Tree for PABPC1P10 (if available)

No data available for Orthologs for PABPC1P10 Gene

Paralogs for PABPC1P10 Gene

No data available for Paralogs for PABPC1P10 Gene

Variants for PABPC1P10 Gene

Additional Variant Information for PABPC1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PABPC1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PABPC1P10 Gene

Disorders for PABPC1P10 Gene

No disorders were found for PABPC1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PABPC1P10 Gene

Publications for PABPC1P10 Gene

  1. Localization of the human poly(A)-binding protein gene (PAB1) to chromosomal regions 3q22-q25, 12q13-q14, and 13q12-q13 by in situ hybridization. (PMID: 8432538) Morris CM … Bodger MP (Genomics 1993) 2 3 54
  2. A novel poly(A)-binding protein acts as a specificity factor in the second phase of messenger RNA polyadenylation. (PMID: 1878970) Wahle E (Cell 1991) 3 54

Products for PABPC1P10 Gene

Sources for PABPC1P10 Gene