Aliases for P4HA2-AS1 Gene

Subcategory (RNA class) for P4HA2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for P4HA2-AS1 Gene

  • P4HA2 Antisense RNA 1 2 3 5
  • P4HA2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • P4HA2-AS1 2 168
  • NONHSAG041511 92
  • HSALNG0044813 167

External Ids for P4HA2-AS1 Gene

Previous GeneCards Identifiers for P4HA2-AS1 Gene

  • GC05P131521

Summaries for P4HA2-AS1 Gene

GeneCards Summary for P4HA2-AS1 Gene

P4HA2-AS1 (P4HA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for P4HA2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for P4HA2-AS1 Gene

Genomics for P4HA2-AS1 Gene

GeneHancer (GH) Regulatory Elements for P4HA2-AS1 Gene

Promoters and enhancers for P4HA2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J132183 Enhancer 0.3 Ensembl 500.7 -1.0 -975 0.2 FOS ZNF596 P4HA2-AS1 P4HA2 ENSG00000224015
GH05J132098 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 15.4 -83.0 -82975 8.2 EP300 SP1 GTF2E2 JUND FOS PHB2 ZIC2 ZBTB11 AFF1 TRIM28 P4HA2-AS1 SLC22A5 CSF2 P4HA2 ENSG00000253067 IL3 ENSG00000224015 SLC22A4 RAPGEF6 IRF1
GH05J132276 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.5 +94.8 94837 5.8 NRF1 NCOR1 ZNF740 MYC SKI KDM5B MBD2 CTCF ZNF316 MAFF ENSG00000202533 IL4 ENSG00000234290 P4HA2-AS1 ENSG00000224015 MIR3936HG SLC22A5 P4HA2 RAPGEF6 MEIKIN
GH05J132093 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -90.2 -90172 3 FOS ZIC2 SAP130 FOSL2 MEF2B JUND EBF1 IKZF1 ZFP91 HDGF IL3 ENSG00000224015 P4HA2-AS1 SLC22A5 RAPGEF6 FNIP1 SLC22A4 P4HA2 IRF1 ENSG00000253067
GH05J132073 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 10.9 -110.5 -110475 3.2 USF1 ZIC2 MYC FOXA2 MAX ATF3 ZNF592 KLF13 ZFHX2 IRF1 CSF2 P4HA2 ENSG00000224015 P4HA2-AS1 PDLIM4 MEIKIN ENSG00000253067
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around P4HA2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for P4HA2-AS1 Gene

Genomic Locations for P4HA2-AS1 Gene
chr5:132,184,876-132,210,002
(GRCh38/hg38)
Size:
25,127 bases
Orientation:
Plus strand
chr5:131,520,569-131,528,501
(GRCh37/hg19)
Size:
7,933 bases
Orientation:
Plus strand

Genomic View for P4HA2-AS1 Gene

Genes around P4HA2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
P4HA2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for P4HA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for P4HA2-AS1 Gene

Proteins for P4HA2-AS1 Gene

Post-translational modifications for P4HA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for P4HA2-AS1 Gene

Domains & Families for P4HA2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for P4HA2-AS1 Gene

Function for P4HA2-AS1 Gene

Phenotypes From GWAS Catalog for P4HA2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for P4HA2-AS1 Gene

Localization for P4HA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for P4HA2-AS1 Gene

Pathways & Interactions for P4HA2-AS1 Gene

PathCards logo

SuperPathways for P4HA2-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for P4HA2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for P4HA2-AS1 Gene

Drugs & Compounds for P4HA2-AS1 Gene

No Compound Related Data Available

Transcripts for P4HA2-AS1 Gene

mRNA/cDNA for P4HA2-AS1 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
3 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for P4HA2-AS1 Gene

No ASD Table

Relevant External Links for P4HA2-AS1 Gene

GeneLoc Exon Structure for
P4HA2-AS1

Expression for P4HA2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for P4HA2-AS1 Gene

genes like me logo Genes that share expression patterns with P4HA2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for P4HA2-AS1 Gene

Orthologs for P4HA2-AS1 Gene

Evolution for P4HA2-AS1 Gene

ENSEMBL:
Gene Tree for P4HA2-AS1 (if available)
TreeFam:
Gene Tree for P4HA2-AS1 (if available)

No data available for Orthologs for P4HA2-AS1 Gene

Paralogs for P4HA2-AS1 Gene

No data available for Paralogs for P4HA2-AS1 Gene

Variants for P4HA2-AS1 Gene

Additional dbSNP identifiers (rs#s) for P4HA2-AS1 Gene

Additional Variant Information for P4HA2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
P4HA2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for P4HA2-AS1 Gene

Disorders for P4HA2-AS1 Gene

Additional Disease Information for P4HA2-AS1

No disorders were found for P4HA2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for P4HA2-AS1 Gene

Publications for P4HA2-AS1 Gene

No publications were found for P4HA2-AS1 Gene.

Products for P4HA2-AS1 Gene

Sources for P4HA2-AS1 Gene