Aliases for P3R3URF Gene

Aliases for P3R3URF Gene

  • PIK3R3 Upstream Reading Frame 2 3 5
  • PIK3R3 Upstream Open Reading Frame Protein 3 4
  • P3R3URF 5

External Ids for P3R3URF Gene

Summaries for P3R3URF Gene

GeneCards Summary for P3R3URF Gene

P3R3URF (PIK3R3 Upstream Reading Frame) is a Protein Coding gene.

Additional gene information for P3R3URF Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for P3R3URF Gene

Genomics for P3R3URF Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for P3R3URF Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J046176 Promoter 0.4 EPDnew 600.7 0.0 -20 0.1 PRDM10 P3R3URF P3R3URF-PIK3R3 PIK3R3 TSPAN1 lnc-POMGNT1-1 lnc-PIK3R3-3 LURAP1
GH01J046177 Enhancer 0.3 Ensembl 600.7 +0.2 187 0.2 PRDM10 P3R3URF P3R3URF-PIK3R3 PIK3R3 TSPAN1 lnc-POMGNT1-1
GH01J046196 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.5 -21.8 -21758 2.8 HNRNPL KDM1A ZNF692 POLR2A ZNF143 RBFOX2 REST NR2C1 ZNF24 BRD4 POMGNT1 LURAP1 TOE1 GPBP1L1 LRRC41 P3R3URF PIK3R3 TSPAN1 RAD54L RPL7AP16
GH01J046128 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 11.1 +44.4 44435 8.1 BRCA1 RNF2 HNRNPL CREB1 GATAD2A ATF7 PRDM10 ZNF629 REST TFE3 PIK3R3 LOC101929626 TOE1 LRRC41 GPBP1L1 RPL7AP16 MUTYH EFCAB14-AS1 RPS15AP10 MOB3C
GH01J046202 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 11.4 -28.3 -28251 4.4 PRDM10 ZNF629 RFX1 ZNF692 MTA2 ZNF143 ZIC2 ZSCAN4 PATZ1 ZNF740 LURAP1 NSUN4 ZSWIM5 RAD54L P3R3URF PIK3R3 TSPAN1 MUTYH POMGNT1 MN308730
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around P3R3URF on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for P3R3URF

Genomic Locations for P3R3URF Gene

Genomic Locations for P3R3URF Gene
chr1:46,175,486-46,176,488
(GRCh38/hg38)
Size:
1,003 bases
Orientation:
Minus strand
chr1:46,641,158-46,642,150
(GRCh37/hg19)
Size:
993 bases
Orientation:
Minus strand

Genomic View for P3R3URF Gene

Genes around P3R3URF on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
P3R3URF Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for P3R3URF Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for P3R3URF Gene

Proteins for P3R3URF Gene

  • Protein details for P3R3URF Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A087WWA1-P3URF_HUMAN
    Recommended name:
    PIK3R3 upstream open reading frame protein
    Protein Accession:
    A0A087WWA1

    Protein attributes for P3R3URF Gene

    Size:
    95 amino acids
    Molecular mass:
    10952 Da
    Quaternary structure:
    No Data Available

neXtProt entry for P3R3URF Gene

Post-translational modifications for P3R3URF Gene

No Post-translational modifications

Other Protein References for P3R3URF Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for P3R3URF Gene

Domains & Families for P3R3URF Gene

Protein Domains for P3R3URF Gene

ProtoNet:
genes like me logo Genes that share domains with P3R3URF: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for P3R3URF Gene

Function for P3R3URF Gene

Phenotypes From GWAS Catalog for P3R3URF Gene

Gene Ontology (GO) - Molecular Function for P3R3URF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046935 1-phosphatidylinositol-3-kinase regulator activity IBA 21873635
genes like me logo Genes that share ontologies with P3R3URF: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for P3R3URF Gene

Localization for P3R3URF Gene

Gene Ontology (GO) - Cellular Components for P3R3URF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005942 phosphatidylinositol 3-kinase complex IBA 21873635
genes like me logo Genes that share ontologies with P3R3URF: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for P3R3URF Gene

Pathways & Interactions for P3R3URF Gene

PathCards logo

SuperPathways for P3R3URF Gene

No Data Available

Interacting Proteins for P3R3URF Gene

Gene Ontology (GO) - Biological Process for P3R3URF Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046854 phosphatidylinositol phosphorylation IBA 21873635
genes like me logo Genes that share ontologies with P3R3URF: view

No data available for Pathways by source and SIGNOR curated interactions for P3R3URF Gene

Drugs & Compounds for P3R3URF Gene

No Compound Related Data Available

Transcripts for P3R3URF Gene

mRNA/cDNA for P3R3URF Gene

1 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for P3R3URF Gene

No ASD Table

Relevant External Links for P3R3URF Gene

GeneLoc Exon Structure for
P3R3URF

Expression for P3R3URF Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for P3R3URF Gene

Orthologs for P3R3URF Gene

Evolution for P3R3URF Gene

ENSEMBL:
Gene Tree for P3R3URF (if available)
TreeFam:
Gene Tree for P3R3URF (if available)

No data available for Orthologs for P3R3URF Gene

Paralogs for P3R3URF Gene

No data available for Paralogs for P3R3URF Gene

Variants for P3R3URF Gene

Additional dbSNP identifiers (rs#s) for P3R3URF Gene

Additional Variant Information for P3R3URF Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
P3R3URF

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for P3R3URF Gene

Disorders for P3R3URF Gene

No disorders were found for P3R3URF Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for P3R3URF Gene

Publications for P3R3URF Gene

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4

No data available for Mastermind for P3R3URF Gene

Products for P3R3URF Gene

Sources for P3R3URF Gene