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Aliases for P3R3URF Gene

Aliases for P3R3URF Gene

  • PIK3R3 Upstream Reading Frame 2 3 5
  • PIK3R3 Upstream Open Reading Frame Protein 3 4

External Ids for P3R3URF Gene

Summaries for P3R3URF Gene

GeneCards Summary for P3R3URF Gene

P3R3URF (PIK3R3 Upstream Reading Frame) is a Protein Coding gene.

Additional gene information for P3R3URF Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for P3R3URF Gene

Genomics for P3R3URF Gene

GeneHancer (GH) Regulatory Elements for P3R3URF Gene

Promoters and enhancers for P3R3URF Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J046176 Promoter/Enhancer 0.9 EPDnew Ensembl 600.7 0.0 -23 0.2 ZNF664 PRDM10 LOC110117498-PIK3R3 P3R3URF PIK3R3 TSPAN1 LURAP1
GH01J046196 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.5 -21.8 -21768 2.8 CC2D1A ZFX MLLT1 POLR2A GTF2F1 ZNF687 ZSCAN21 ZBTB7A YY1 EGR1 POMGNT1 LURAP1 TOE1 GPBP1L1 LRRC41 P3R3URF PIK3R3 TSPAN1 RAD54L ENSG00000234329
GH01J046128 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +44.5 44525 8.3 MTA3 ZNF652 CC2D1A ZFX SP1 ELF3 MNT SIX5 ZNF148 NKRF PIK3R3 LOC101929626 TOE1 LRRC41 GPBP1L1 ENSG00000234329 EFCAB14-AS1 RPS15AP10 MUTYH MOB3C
GH01J046202 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.4 -28.3 -28261 4.4 ZFX ZKSCAN8 ZNF121 GTF2F1 TRIM24 SP7 KLF14 MZF1 EGR1 GLIS2 LURAP1 NSUN4 ZSWIM5 RAD54L TSPAN1 P3R3URF PIK3R3 MUTYH POMGNT1
GH01J046043 Promoter/Enhancer 1.2 EPDnew ENCODE 11.7 +132.7 132735 1.1 ZNF121 RELA CREM IKZF1 IKZF2 DPF2 EED RUNX3 BCLAF1 ELF1 PIK3R3 PIR32898 PIR44986 P3R3URF TSPAN1 LURAP1 POMGNT1 ENSG00000226957 LOC110117498-PIK3R3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around P3R3URF on UCSC Golden Path with GeneCards custom track

Genomic Locations for P3R3URF Gene

Genomic Locations for P3R3URF Gene
chr1:46,175,486-46,176,478
(GRCh38/hg38)
Size:
993 bases
Orientation:
Minus strand
chr1:46,641,158-46,642,150
(GRCh37/hg19)
Size:
993 bases
Orientation:
Minus strand

Genomic View for P3R3URF Gene

Genes around P3R3URF on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
P3R3URF Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for P3R3URF Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for P3R3URF Gene

Proteins for P3R3URF Gene

  • Protein details for P3R3URF Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A087WWA1-P3URF_HUMAN
    Recommended name:
    PIK3R3 upstream open reading frame protein
    Protein Accession:
    A0A087WWA1

    Protein attributes for P3R3URF Gene

    Size:
    95 amino acids
    Molecular mass:
    10952 Da
    Quaternary structure:
    No Data Available

neXtProt entry for P3R3URF Gene

Post-translational modifications for P3R3URF Gene

No Post-translational modifications

Other Protein References for P3R3URF Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for P3R3URF Gene

Domains & Families for P3R3URF Gene

Protein Domains for P3R3URF Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with P3R3URF: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for P3R3URF Gene

Function for P3R3URF Gene

Phenotypes From GWAS Catalog for P3R3URF Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for P3R3URF Gene

Localization for P3R3URF Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for P3R3URF Gene

Pathways & Interactions for P3R3URF Gene

PathCards logo

SuperPathways for P3R3URF Gene

No Data Available

Interacting Proteins for P3R3URF Gene

Gene Ontology (GO) - Biological Process for P3R3URF Gene

None

No data available for Pathways by source and SIGNOR curated interactions for P3R3URF Gene

Drugs & Compounds for P3R3URF Gene

No Compound Related Data Available

Transcripts for P3R3URF Gene

mRNA/cDNA for P3R3URF Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for P3R3URF Gene

No ASD Table

Relevant External Links for P3R3URF Gene

GeneLoc Exon Structure for
P3R3URF
ECgene alternative splicing isoforms for
P3R3URF

Expression for P3R3URF Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for P3R3URF Gene

Orthologs for P3R3URF Gene

Evolution for P3R3URF Gene

ENSEMBL:
Gene Tree for P3R3URF (if available)
TreeFam:
Gene Tree for P3R3URF (if available)

No data available for Orthologs for P3R3URF Gene

Paralogs for P3R3URF Gene

No data available for Paralogs for P3R3URF Gene

Variants for P3R3URF Gene

Sequence variations from dbSNP and Humsavar for P3R3URF Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000053163 -- 46,176,126(-) T/C intron_variant
rs1000804489 -- 46,176,440(-) C/T coding_sequence_variant, missense_variant
rs1001153534 -- 46,176,708(-) G/T upstream_transcript_variant
rs1001454678 -- 46,176,635(-) G/A/C upstream_transcript_variant
rs1001791600 -- 46,175,773(-) C/T intron_variant

Additional Variant Information for P3R3URF Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
P3R3URF

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for P3R3URF Gene

Disorders for P3R3URF Gene

No disorders were found for P3R3URF Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for P3R3URF Gene

Publications for P3R3URF Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58

No data available for External Links for P3R3URF Gene

Products for P3R3URF Gene

Sources for P3R3URF Gene

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