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Aliases for OVOL1-AS1 Gene

Subcategory (RNA class) for OVOL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OVOL1-AS1 Gene

  • OVOL1 Antisense RNA 1 2 3 5

External Ids for OVOL1-AS1 Gene

Previous GeneCards Identifiers for OVOL1-AS1 Gene

  • GC11M065562

Summaries for OVOL1-AS1 Gene

GeneCards Summary for OVOL1-AS1 Gene

OVOL1-AS1 (OVOL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OVOL1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OVOL1-AS1 Gene

Genomics for OVOL1-AS1 Gene

GeneHancer (GH) Regulatory Elements for OVOL1-AS1 Gene

Promoters and enhancers for OVOL1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I065791 Enhancer 1.2 Ensembl ENCODE dbSUPER 555 -1.8 -1774 2.6 HDGF PKNOX1 SIN3A BMI1 BATF IRF4 SCRT2 ZNF143 ATF7 ETV6 OVOL1-AS1 KRT8P26 OVOL1 SIPA1 CTSW RNASEH2C PIR59464
GH11I065886 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6 -104.6 -104590 18.4 CLOCK ZFP64 FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 ZNF263 SP3 FOSL1 FIBP CCDC85B SNX32 ENSG00000258297 EIF1AD RBM14 MUS81 SART1 POLA2
GH11I065826 Enhancer 0.7 ENCODE dbSUPER 21.2 -37.0 -37046 3.4 MEIS2 ZBTB48 FOXK2 HLF CEBPA HMBOX1 CEBPG SNX32 CTSW OVOL1-AS1 MUS81 CFL1 OVOL1 AP5B1 ENSG00000255404 SART1 SIPA1
GH11I066266 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 6.9 -477.4 -477402 3.7 HDGF ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 ZNF143 SP3 RAB1B LOC105369351 KDM2A EIF1AD FRMD8 LOC105369352 OVOL1-AS1 KLC2 CTSW ENSG00000245156
GH11I065819 Enhancer 0.9 ENCODE dbSUPER 11.9 -31.4 -31360 5.4 CTCF ELF3 SAP130 MLX ZSCAN4 DMAP1 ZNF644 RARA YY1 NR2F6 CTSW MUS81 CFL1 OVOL1-AS1 OVOL1 AP5B1 ENSG00000255404 SART1 SNX32 EFEMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OVOL1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OVOL1-AS1 Gene

Genomic Locations for OVOL1-AS1 Gene
chr11:65,789,001-65,790,868
(GRCh38/hg38)
Size:
1,868 bases
Orientation:
Minus strand
chr11:65,556,522-65,558,339
(GRCh37/hg19)

Genomic View for OVOL1-AS1 Gene

Genes around OVOL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OVOL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OVOL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OVOL1-AS1 Gene

Proteins for OVOL1-AS1 Gene

Post-translational modifications for OVOL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OVOL1-AS1 Gene

Domains & Families for OVOL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OVOL1-AS1 Gene

Function for OVOL1-AS1 Gene

Phenotypes From GWAS Catalog for OVOL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OVOL1-AS1 Gene

Localization for OVOL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OVOL1-AS1 Gene

Pathways & Interactions for OVOL1-AS1 Gene

SuperPathways for OVOL1-AS1 Gene

No Data Available

Interacting Proteins for OVOL1-AS1 Gene

Gene Ontology (GO) - Biological Process for OVOL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OVOL1-AS1 Gene

Drugs & Compounds for OVOL1-AS1 Gene

No Compound Related Data Available

Transcripts for OVOL1-AS1 Gene

mRNA/cDNA for OVOL1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OVOL1-AS1 Gene

No ASD Table

Relevant External Links for OVOL1-AS1 Gene

GeneLoc Exon Structure for
OVOL1-AS1
ECgene alternative splicing isoforms for
OVOL1-AS1

Expression for OVOL1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OVOL1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OVOL1-AS1 Gene

This gene is overexpressed in Testis (x12.6), Skin - Not Sun Exposed (Suprapubic) (x8.3), Skin - Sun Exposed (Lower leg) (x6.4), and Kidney - Cortex (x5.4).
genes like me logo Genes that share expression patterns with OVOL1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OVOL1-AS1 Gene

Orthologs for OVOL1-AS1 Gene

Evolution for OVOL1-AS1 Gene

ENSEMBL:
Gene Tree for OVOL1-AS1 (if available)
TreeFam:
Gene Tree for OVOL1-AS1 (if available)

No data available for Orthologs for OVOL1-AS1 Gene

Paralogs for OVOL1-AS1 Gene

No data available for Paralogs for OVOL1-AS1 Gene

Variants for OVOL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OVOL1-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000495589 -- 65,792,248(-) G/A upstream_transcript_variant
rs1000547189 -- 65,791,993(-) G/C upstream_transcript_variant
rs1001222322 -- 65,791,939(-) T/C upstream_transcript_variant
rs1001938764 -- 65,792,322(-) G/A upstream_transcript_variant
rs1002028020 -- 65,792,611(-) G/A upstream_transcript_variant

Additional Variant Information for OVOL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OVOL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OVOL1-AS1 Gene

Disorders for OVOL1-AS1 Gene

Additional Disease Information for OVOL1-AS1

No disorders were found for OVOL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OVOL1-AS1 Gene

Publications for OVOL1-AS1 Gene

No publications were found for OVOL1-AS1 Gene.

Products for OVOL1-AS1 Gene

Sources for OVOL1-AS1 Gene

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