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OVCH1-AS1 (OVCH1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with OVCH1-AS1 include Hepatocellular Carcinoma.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH12J029389 | Promoter/Enhancer | 1.2 | EPDnew Ensembl ENCODE | 600.7 | +1.7 | 1720 | 3.6 | SOX6 CEBPA SCRT2 CEBPB FOXA2 FOSL1 FOXP1 SPI1 POLR2A ZBTB33 | OVCH1-AS1 ENSG00000257176 FAR2 ERGIC2 piR-43105-107 OVCH1 | |
GH12J029428 | Enhancer | 1 | Ensembl ENCODE | 0.3 | +39.6 | 39625 | 4.2 | CTCF TEAD4 JUND STAT3 PKNOX1 REST RAD21 SP1 TRIM22 GTF2E2 | ERGIC2 OVCH1 ENSG00000257176 piR-37670 OVCH1-AS1 RF00017-1119 | |
GH12J029402 | Enhancer | 0.4 | FANTOM5 | 0.4 | +13.0 | 12976 | 0.3 | ZNF512 ZNF366 | piR-43105-107 OVCH1-AS1 ERGIC2 OVCH1 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000077BBB4_9606 | lncRNA | 743 | 4 |
Ensembl: ENST00000549411 (view in UCSC) , LncBook: HSALNT0187197, LNCipedia: OVCH1-AS1:6, NONCODE: NONHSAT027492.2, |
URS000075E73F_9606 | lncRNA | 999 | 3 |
RefSeq: NR_073172, LNCipedia: OVCH1-AS1:2, NONCODE: NONHSAT162001.1, |
URS0000BC99B7_9606 | lncRNA | 5529 | 2 |
Ensembl: ENST00000641955 (view in UCSC) , LNCipedia: OVCH1-AS1:7, |
URS000075CEFB_9606 | lncRNA | 5291 | 2 |
HGNC: 44311, RefSeq: NR_027451, |
URS000075D789_9606 | lncRNA | 1287 | 2 |
HGNC: 44484, RefSeq: NR_073170, |
This gene was present in the common ancestor of human and chimp.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | OVCH1-AS1 31 |
|
OneToOne |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv788n106 | CNV | deletion | 24896259 |
esv1371683 | CNV | deletion | 17803354 |
esv2354786 | CNV | deletion | 18987734 |
esv2458414 | CNV | deletion | 19546169 |
esv2745687 | CNV | deletion | 23290073 |
esv29688 | CNV | gain | 19812545 |
esv3253162 | CNV | deletion | 24192839 |
esv3436761 | CNV | duplication | 20981092 |
esv3548964 | CNV | deletion | 23714750 |
esv3574 | CNV | loss | 18987735 |
esv3580214 | CNV | loss | 25503493 |
esv6212 | CNV | loss | 19470904 |
esv997212 | CNV | deletion | 20482838 |
nsv1069655 | CNV | deletion | 25765185 |
nsv1070519 | CNV | deletion | 25765185 |
nsv469190 | CNV | gain | 19166990 |
nsv525100 | CNV | loss | 19592680 |
nsv527807 | CNV | loss | 19592680 |
nsv557915 | CNV | loss | 21841781 |
nsv557916 | CNV | loss | 21841781 |
nsv557917 | CNV | gain | 21841781 |
nsv820607 | CNV | deletion | 20802225 |
nsv958647 | CNV | deletion | 24416366 |
nsv975466 | CNV | duplication | 23825009 |
Disorder | Aliases | PubMed IDs |
---|---|---|
hepatocellular carcinoma |
|