Aliases for OTX2P2 Gene

Aliases for OTX2P2 Gene

  • OTX2 Pseudogene 2 2 3 5
  • Orthodenticle Homeobox 2 Pseudogene 2 2 3
  • Orthodenticle Homeobox 2 Pseudogene 3
  • OTX2P2 5

External Ids for OTX2P2 Gene

Summaries for OTX2P2 Gene

GeneCards Summary for OTX2P2 Gene

OTX2P2 (OTX2 Pseudogene 2) is a Pseudogene.

Additional gene information for OTX2P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OTX2P2 Gene

Genomics for OTX2P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OTX2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J146414 Enhancer 0.6 VISTA Ensembl 0.2 -62.0 -61954 2 POLR2A LOC105373667 OTX2P2
GH02J146467 Enhancer 0.2 Ensembl 0.4 -10.1 -10054 0.2 OTX2P2 LOC105373667
GH02J146431 Enhancer 0.2 FANTOM5 0.3 -45.6 -45616 0 LOC105373667 OTX2P2
GH02J146437 Enhancer 0.2 Ensembl 0.3 -39.5 -39454 0.6 LOC105373667 OTX2P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OTX2P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OTX2P2 Gene

Genomic Locations for OTX2P2 Gene
chr2:146,477,355-146,478,113
(GRCh38/hg38)
Size:
759 bases
Orientation:
Plus strand
chr2:147,234,923-147,235,681
(GRCh37/hg19)
Size:
759 bases
Orientation:
Plus strand

Genomic View for OTX2P2 Gene

Genes around OTX2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OTX2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OTX2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OTX2P2 Gene

Proteins for OTX2P2 Gene

Post-translational modifications for OTX2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OTX2P2 Gene

Domains & Families for OTX2P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OTX2P2 Gene

Function for OTX2P2 Gene

Phenotypes From GWAS Catalog for OTX2P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OTX2P2 Gene

Localization for OTX2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OTX2P2 Gene

Pathways & Interactions for OTX2P2 Gene

PathCards logo

SuperPathways for OTX2P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for OTX2P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OTX2P2 Gene

Drugs & Compounds for OTX2P2 Gene

No Compound Related Data Available

Transcripts for OTX2P2 Gene

mRNA/cDNA for OTX2P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OTX2P2 Gene

No ASD Table

Relevant External Links for OTX2P2 Gene

GeneLoc Exon Structure for
OTX2P2

Expression for OTX2P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OTX2P2 Gene

Orthologs for OTX2P2 Gene

Evolution for OTX2P2 Gene

ENSEMBL:
Gene Tree for OTX2P2 (if available)
TreeFam:
Gene Tree for OTX2P2 (if available)

No data available for Orthologs for OTX2P2 Gene

Paralogs for OTX2P2 Gene

No data available for Paralogs for OTX2P2 Gene

Variants for OTX2P2 Gene

Additional Variant Information for OTX2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OTX2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OTX2P2 Gene

Disorders for OTX2P2 Gene

No disorders were found for OTX2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OTX2P2 Gene

Publications for OTX2P2 Gene

No publications were found for OTX2P2 Gene.

No data available for Mastermind for OTX2P2 Gene

Products for OTX2P2 Gene

Sources for OTX2P2 Gene