Aliases for OTUD4P1 Gene

Aliases for OTUD4P1 Gene

  • OTUD4 Pseudogene 1 2 3 5
  • HIN1L 2 3
  • OTU Domain Containing 4 Pseudogene 3
  • HIN1-Like Cysteine Protease 3
  • OTUD4P1 5

External Ids for OTUD4P1 Gene

Previous GeneCards Identifiers for OTUD4P1 Gene

  • GC12P004477
  • GC12P003878
  • GC12P004364
  • GC12P005878
  • GC12P006033
  • GC12P006055
  • GC12P006575
  • GC12P004689
  • GC12P004852
  • GC12P005008
  • GC12P005171
  • GC12P005322
  • GC12P005484
  • GC12P005643
  • GC12P005777

Summaries for OTUD4P1 Gene

GeneCards Summary for OTUD4P1 Gene

OTUD4P1 (OTUD4 Pseudogene 1) is a Pseudogene.

Additional gene information for OTUD4P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OTUD4P1 Gene

Genomics for OTUD4P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OTUD4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J003838 Promoter/Enhancer 0.8 FANTOM5 Ensembl 600.7 -0.6 -558 1.4 IKZF2 RUNX3 IKZF1 ZBTB33 OTUD4P1 lnc-PRMT8-7 PARP11 lnc-CRACR2A-7 CRACR2A
GH12J003099 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.3 -735.2 -735159 8.2 HNRNPL GATAD2A ZBTB33 RCOR2 ZIC2 RXRB IRF2 SP1 GABPA PBX2 TSPAN9 TULP3 OTUD4P1 piR-43099-098 ENSG00000278469 PRMT8
GH12J003526 Enhancer 0.7 Ensembl ENCODE 18.2 -312.0 -311977 1.4 SOX6 CEBPB JUN JUND FOSL1 CEBPG ATF4 ATF3 ZNF507 OTUD4P1 TULP3 ENSG00000243507 ENSG00000256691 hsa-miR-5095-083 HSALNG0088663 PRMT8 CRACR2A
GH12J003832 Enhancer 0.7 Ensembl ENCODE 0.4 -5.8 -5758 1.8 FOXA2 SAP130 CTCF FOSL2 TEAD3 RAD21 SOX5 ARID3A RBPJ FOXA3 PARP11 OTUD4P1 lnc-CRACR2A-7 CRACR2A
GH12J003843 Enhancer 0.2 Ensembl 0.7 +4.6 4642 0.2 MN297119-001 OTUD4P1 lnc-PRMT8-7 PARP11 CRACR2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OTUD4P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OTUD4P1 Gene

Genomic Locations for OTUD4P1 Gene
chr12:3,839,459-3,846,276
(GRCh38/hg38)
Size:
6,818 bases
Orientation:
Plus strand
chr12:3,948,625-3,955,439
(GRCh37/hg19)
Size:
6,815 bases
Orientation:
Plus strand

Genomic View for OTUD4P1 Gene

Genes around OTUD4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OTUD4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OTUD4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OTUD4P1 Gene

Proteins for OTUD4P1 Gene

Post-translational modifications for OTUD4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OTUD4P1 Gene

Domains & Families for OTUD4P1 Gene

Suggested Antigen Peptide Sequences for OTUD4P1 Gene

GenScript: Design optimal peptide antigens:
  • Putative HIN1-like protein (HIN1L_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OTUD4P1 Gene

Function for OTUD4P1 Gene

Phenotypes From GWAS Catalog for OTUD4P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OTUD4P1 Gene

Localization for OTUD4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OTUD4P1 Gene

Pathways & Interactions for OTUD4P1 Gene

PathCards logo

SuperPathways for OTUD4P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for OTUD4P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OTUD4P1 Gene

Drugs & Compounds for OTUD4P1 Gene

No Compound Related Data Available

Transcripts for OTUD4P1 Gene

mRNA/cDNA for OTUD4P1 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OTUD4P1 Gene

No ASD Table

Relevant External Links for OTUD4P1 Gene

GeneLoc Exon Structure for
OTUD4P1

Expression for OTUD4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OTUD4P1 Gene

mRNA differential expression in normal tissues according to GTEx for OTUD4P1 Gene

This gene is overexpressed in Testis (x8.4).

Protein differential expression in normal tissues from HIPED for OTUD4P1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for OTUD4P1 Gene



Protein tissue co-expression partners for OTUD4P1 Gene

- Elite partner
genes like me logo Genes that share expression patterns with OTUD4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OTUD4P1 Gene

Orthologs for OTUD4P1 Gene

Evolution for OTUD4P1 Gene

ENSEMBL:
Gene Tree for OTUD4P1 (if available)
TreeFam:
Gene Tree for OTUD4P1 (if available)

No data available for Orthologs for OTUD4P1 Gene

Paralogs for OTUD4P1 Gene

No data available for Paralogs for OTUD4P1 Gene

Variants for OTUD4P1 Gene

Additional Variant Information for OTUD4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OTUD4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OTUD4P1 Gene

Disorders for OTUD4P1 Gene

No disorders were found for OTUD4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OTUD4P1 Gene

Publications for OTUD4P1 Gene

  1. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. (PMID: 19167051) Weinmann L … Meister G (Cell 2009) 3
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer SE … Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team (Nature 2006) 3
  3. Human and mouse proteases: a comparative genomic approach. (PMID: 12838346) Puente XS … López-Otín C (Nature reviews. Genetics 2003) 3

Products for OTUD4P1 Gene

Sources for OTUD4P1 Gene