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Aliases for OTUD4P1 Gene

Aliases for OTUD4P1 Gene

  • OTUD4 Pseudogene 1 2 3 5
  • OTU Domain Containing 4 Pseudogene 3
  • HIN1-Like Cysteine Protease 3
  • HIN1L 3

External Ids for OTUD4P1 Gene

Previous GeneCards Identifiers for OTUD4P1 Gene

  • GC12P004477
  • GC12P003878
  • GC12P004364
  • GC12P005878
  • GC12P004689
  • GC12P004852
  • GC12P005008
  • GC12P005171
  • GC12P005322
  • GC12P005484
  • GC12P005643
  • GC12P005777

Summaries for OTUD4P1 Gene

GeneCards Summary for OTUD4P1 Gene

OTUD4P1 (OTUD4 Pseudogene 1) is a Pseudogene.

Additional gene information for OTUD4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OTUD4P1 Gene

Genomics for OTUD4P1 Gene

GeneHancer (GH) Regulatory Elements for OTUD4P1 Gene

Promoters and enhancers for OTUD4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J003838 Promoter/Enhancer 1.1 FANTOM5 Ensembl 600.7 -0.6 -558 1.4 IKZF1 ZBTB33 IKZF2 RUNX3 OTUD4P1 PARP11 GC12P006204
GH12J003101 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.3 -735.0 -734955 7.4 ELF3 MNT ZNF121 RERE SP1 HNF1A PPARG SP5 ZNF644 KAT8 TSPAN9 TULP3 OTUD4P1 GC12P003110 GC12P003091 PIR34599
GH12J003526 Enhancer 0.7 Ensembl ENCODE 18.2 -312.0 -311977 1.4 CEBPB JUN SOX6 JUND FOSL1 CEBPG ZNF507 OTUD4P1 TULP3 ENSG00000243507 ENSG00000256691 GC12M003981 GC12P006214 GC12P006129 ENSG00000280202 PRMT8
GH12J004364 Enhancer 0.4 Ensembl 18.1 +526.9 526942 4 RFX1 ZNF507 OTUD4P1 FGF6 C12orf4 TIGAR FGF23 RPS15P7 ENSG00000285901
GH12J003832 Enhancer 0.7 Ensembl ENCODE 0.4 -5.7 -5715 1.7 FOXA2 SAP130 CTCF TEAD3 SOX5 FOXA3 RBPJ PARP11 OTUD4P1 GC12P006204
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OTUD4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OTUD4P1 Gene

Genomic Locations for OTUD4P1 Gene
chr12:3,839,459-3,846,276
(GRCh38/hg38)
Size:
6,818 bases
Orientation:
Plus strand
chr12:3,948,625-3,955,439
(GRCh37/hg19)
Size:
6,815 bases
Orientation:
Plus strand

Genomic View for OTUD4P1 Gene

Genes around OTUD4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OTUD4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OTUD4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OTUD4P1 Gene

Proteins for OTUD4P1 Gene

Post-translational modifications for OTUD4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OTUD4P1 Gene

Domains & Families for OTUD4P1 Gene

Suggested Antigen Peptide Sequences for OTUD4P1 Gene

GenScript: Design optimal peptide antigens:
  • Putative HIN1-like protein (HIN1L_HUMAN)

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for OTUD4P1 Gene

Function for OTUD4P1 Gene

Phenotypes From GWAS Catalog for OTUD4P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OTUD4P1 Gene

Localization for OTUD4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OTUD4P1 Gene

Pathways & Interactions for OTUD4P1 Gene

PathCards logo

SuperPathways for OTUD4P1 Gene

No Data Available

Interacting Proteins for OTUD4P1 Gene

Gene Ontology (GO) - Biological Process for OTUD4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OTUD4P1 Gene

Drugs & Compounds for OTUD4P1 Gene

No Compound Related Data Available

Transcripts for OTUD4P1 Gene

mRNA/cDNA for OTUD4P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OTUD4P1 Gene

No ASD Table

Relevant External Links for OTUD4P1 Gene

GeneLoc Exon Structure for
OTUD4P1
ECgene alternative splicing isoforms for
OTUD4P1

Expression for OTUD4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OTUD4P1 Gene

mRNA differential expression in normal tissues according to GTEx for OTUD4P1 Gene

This gene is overexpressed in Testis (x8.4).

Protein differential expression in normal tissues from HIPED for OTUD4P1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for OTUD4P1 Gene



Protein tissue co-expression partners for OTUD4P1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of OTUD4P1 Gene:

OTUD4P1
genes like me logo Genes that share expression patterns with OTUD4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OTUD4P1 Gene

Orthologs for OTUD4P1 Gene

Evolution for OTUD4P1 Gene

ENSEMBL:
Gene Tree for OTUD4P1 (if available)
TreeFam:
Gene Tree for OTUD4P1 (if available)

No data available for Orthologs for OTUD4P1 Gene

Paralogs for OTUD4P1 Gene

No data available for Paralogs for OTUD4P1 Gene

Variants for OTUD4P1 Gene

Additional Variant Information for OTUD4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OTUD4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OTUD4P1 Gene

Disorders for OTUD4P1 Gene

No disorders were found for OTUD4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OTUD4P1 Gene

Publications for OTUD4P1 Gene

  1. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. (PMID: 19167051) Weinmann L … Meister G (Cell 2009) 3 58
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer SE … Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team (Nature 2006) 3 58
  3. Human and mouse proteases: a comparative genomic approach. (PMID: 12838346) Puente XS … López-Otín C (Nature reviews. Genetics 2003) 3 58

Products for OTUD4P1 Gene

Sources for OTUD4P1 Gene

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