Aliases for OSTCP1 Gene

Aliases for OSTCP1 Gene

  • Oligosaccharyltransferase Complex Subunit Pseudogene 1 2 3 5
  • Oligosaccharyltransferase Complex Subunit-Like 2
  • DC2 Protein-Like 2
  • OSTCL 3
  • DC2L 3

External Ids for OSTCP1 Gene

Previous HGNC Symbols for OSTCP1 Gene

  • OSTCL

Previous GeneCards Identifiers for OSTCP1 Gene

  • GC06M159265

Summaries for OSTCP1 Gene

GeneCards Summary for OSTCP1 Gene

OSTCP1 (Oligosaccharyltransferase Complex Subunit Pseudogene 1) is a Pseudogene.

Additional gene information for OSTCP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OSTCP1 Gene

Genomics for OSTCP1 Gene

GeneHancer (GH) Regulatory Elements for OSTCP1 Gene

Promoters and enhancers for OSTCP1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OSTCP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OSTCP1 Gene

Genomic Locations for OSTCP1 Gene
chr6:158,841,117-158,857,632
(GRCh38/hg38)
Size:
16,516 bases
Orientation:
Minus strand
chr6:159,262,149-159,278,664
(GRCh37/hg19)
Size:
16,516 bases
Orientation:
Minus strand

Genomic View for OSTCP1 Gene

Genes around OSTCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSTCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSTCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSTCP1 Gene

Proteins for OSTCP1 Gene

Post-translational modifications for OSTCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSTCP1 Gene

Domains & Families for OSTCP1 Gene

Suggested Antigen Peptide Sequences for OSTCP1 Gene

GenScript: Design optimal peptide antigens:
  • Oligosaccharyltransferase complex subunit-like (Q8TBU1_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OSTCP1 Gene

Function for OSTCP1 Gene

Phenotypes From GWAS Catalog for OSTCP1 Gene

genes like me logo Genes that share phenotypes with OSTCP1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OSTCP1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSTCP1 Gene

Localization for OSTCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OSTCP1 Gene

Pathways & Interactions for OSTCP1 Gene

PathCards logo

SuperPathways for OSTCP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for OSTCP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OSTCP1 Gene

Drugs & Compounds for OSTCP1 Gene

No Compound Related Data Available

Transcripts for OSTCP1 Gene

mRNA/cDNA for OSTCP1 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OSTCP1

Alternative Splicing Database (ASD) splice patterns (SP) for OSTCP1 Gene

No ASD Table

Relevant External Links for OSTCP1 Gene

GeneLoc Exon Structure for
OSTCP1

Expression for OSTCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OSTCP1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OSTCP1

SOURCE GeneReport for Unigene cluster for OSTCP1 Gene:

Hs.487035
genes like me logo Genes that share expression patterns with OSTCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OSTCP1 Gene

Orthologs for OSTCP1 Gene

Evolution for OSTCP1 Gene

ENSEMBL:
Gene Tree for OSTCP1 (if available)
TreeFam:
Gene Tree for OSTCP1 (if available)

No data available for Orthologs for OSTCP1 Gene

Paralogs for OSTCP1 Gene

No data available for Paralogs for OSTCP1 Gene

Variants for OSTCP1 Gene

Structural Variations from Database of Genomic Variants (DGV) for OSTCP1 Gene

Variant ID Type Subtype PubMed ID
esv3327787 CNV duplication 20981092
nsv969461 CNV duplication 23825009

Additional Variant Information for OSTCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSTCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for OSTCP1 Gene

Disorders for OSTCP1 Gene

Additional Disease Information for OSTCP1

No disorders were found for OSTCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSTCP1 Gene

Publications for OSTCP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 54
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 54
  3. Systematic identification of pathological lamin A interactors. (PMID: 24623722) Dittmer TA … Misteli T (Molecular biology of the cell 2014) 3 54
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 54
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P … Vidal M (Genomics 2007) 3 54

Products for OSTCP1 Gene

Sources for OSTCP1 Gene