Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR9A1P Gene

Aliases for OR9A1P Gene

  • Olfactory Receptor Family 9 Subfamily A Member 1 Pseudogene 2 3 5
  • HSHTPCRX06 2 3
  • HTPCRX06 2 3
  • OR9A1 3 4
  • Olfactory Receptor, Family 9, Subfamily A, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 9, Subfamily A, Member 5 Pseudogene 3
  • Putative Olfactory Receptor 9A1 4
  • HSHTPRX06 4
  • OR9A5P 3
  • OR9A1P 5

External Ids for OR9A1P Gene

Previous HGNC Symbols for OR9A1P Gene

  • OR9A1

Previous GeneCards Identifiers for OR9A1P Gene

  • GC07U990162
  • GC07P140917
  • GC07P140994
  • GC07P141040
  • GC07P141233
  • GC07P141587
  • GC07P142616
  • GC07P142929
  • GC07P144259
  • GC07P144400
  • GC07P144584
  • GC07P144824
  • GC07P143073
  • GC07P143223
  • GC07P143417
  • GC07P143568
  • GC07P143718
  • GC07P143845
  • GC07P143986
  • GC07P144115
  • GC07P145074
  • GC07P145362

Summaries for OR9A1P Gene

Entrez Gene Summary for OR9A1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR9A1P Gene

OR9A1P (Olfactory Receptor Family 9 Subfamily A Member 1 Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Olfactory transduction. Gene Ontology (GO) annotations related to this gene include G protein-coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR9A4.

UniProtKB/Swiss-Prot Summary for OR9A1P Gene

Additional gene information for OR9A1P Gene

No data available for CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR9A1P Gene

Genomics for OR9A1P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OR9A1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J141884 Enhancer 0.9 FANTOM5 Ensembl 250.7 -1.6 -1647 2.6 BCL11A TARDBP IRF4 EBF1 CBFB BATF NFATC1 TCF7 MTA3 ATF2 OR9A1P piR-41195-076 OR9A4 WEE2-AS1 CLEC5A MGAM OR9N1P TAS2R38 PRSS37
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR9A1P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OR9A1P Gene

Latest Assembly
chr7:141,887,148-141,888,092
(GRCh38/hg38)
Size:
945 bases
Orientation:
Plus strand

Previous Assembly
chr7:141,586,948-141,587,736
(GRCh37/hg19 by Entrez Gene)
Size:
789 bases
Orientation:
Plus strand

chr7:141,586,948-141,587,892
(GRCh37/hg19 by Ensembl)
Size:
945 bases
Orientation:
Plus strand

Genomic View for OR9A1P Gene

Genes around OR9A1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR9A1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR9A1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR9A1P Gene

Proteins for OR9A1P Gene

  • Protein details for OR9A1P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGU1-OR9A1_HUMAN
    Recommended name:
    Putative olfactory receptor 9A1
    Protein Accession:
    Q8NGU1

    Protein attributes for OR9A1P Gene

    Size:
    263 amino acids
    Molecular mass:
    29546 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05913.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for OR9A1P Gene

Post-translational modifications for OR9A1P Gene

No Post-translational modifications

Other Protein References for OR9A1P Gene

ENSEMBL proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR9A1P Gene

Domains & Families for OR9A1P Gene

Gene Families for OR9A1P Gene

Protein Domains for OR9A1P Gene

Suggested Antigen Peptide Sequences for OR9A1P Gene

GenScript: Design optimal peptide antigens:
  • HSHTPRX06 (OR9A1_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q8NGU1

UniProtKB/Swiss-Prot:

OR9A1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR9A1P: view

Function for OR9A1P Gene

Molecular function for OR9A1P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR9A1P Gene

Gene Ontology (GO) - Molecular Function for OR9A1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR9A1P: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR9A1P Gene

Localization for OR9A1P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR9A1P Gene

Cell membrane. Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR9A1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR9A1P: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OR9A1P Gene

Pathways & Interactions for OR9A1P Gene

PathCards logo

SuperPathways for OR9A1P Gene

genes like me logo Genes that share pathways with OR9A1P: view

Pathways by source for OR9A1P Gene

Gene Ontology (GO) - Biological Process for OR9A1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G protein-coupled receptor signaling pathway IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR9A1P: view

No data available for Interacting Proteins and SIGNOR curated interactions for OR9A1P Gene

Drugs & Compounds for OR9A1P Gene

No Compound Related Data Available

Transcripts for OR9A1P Gene

mRNA/cDNA for OR9A1P Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR9A1P Gene

No ASD Table

Relevant External Links for OR9A1P Gene

GeneLoc Exon Structure for
OR9A1P

Expression for OR9A1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR9A1P Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OR9A1P

SOURCE GeneReport for Unigene cluster for OR9A1P Gene:

Hs.544835
genes like me logo Genes that share expression patterns with OR9A1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR9A1P Gene

Orthologs for OR9A1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR9A1P Gene

Organism Taxonomy Gene Similarity Type Details
Mouse
(Mus musculus)
Mammalia Or9a7 45 Olfr461
  • chr6:40,544,039-40,544,977
Species where no ortholog for OR9A1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR9A1P Gene

ENSEMBL:
Gene Tree for OR9A1P (if available)
TreeFam:
Gene Tree for OR9A1P (if available)
Alliance of Genome Resources:
Additional Orthologs for OR9A1P

Paralogs for OR9A1P Gene

(423) SIMAP similar genes for OR9A1P Gene using alignment to 1 proteins:

  • OR9A1_HUMAN
genes like me logo Genes that share paralogs with OR9A1P: view

Variants for OR9A1P Gene

Additional Variant Information for OR9A1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR9A1P
Leiden Open Variation Database (LOVD)
OR9A1P

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR9A1P Gene

Disorders for OR9A1P Gene

Additional Disease Information for OR9A1P

No disorders were found for OR9A1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR9A1P Gene

Publications for OR9A1P Gene

  1. Expression of members of the putative olfactory receptor gene family in mammalian germ cells. (PMID: 1370859) Parmentier M … Perret J (Nature 1992) 2 3 4

Products for OR9A1P Gene

Sources for OR9A1P Gene