Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR8K1 Gene

Aliases for OR8K1 Gene

  • Olfactory Receptor Family 8 Subfamily K Member 1 2 3 5
  • Olfactory Receptor OR11-182 3 4
  • Olfactory Receptor 8K1 3 4
  • Olfactory Receptor, Family 8, Subfamily N, Member 1 Pseudogene 3
  • Olfactory Receptor, Family 8, Subfamily K, Member 1 2
  • OR11-182 3
  • OR8N1P 3
  • OR8K1 5

External Ids for OR8K1 Gene

Previous GeneCards Identifiers for OR8K1 Gene

  • GC11U990350
  • GC11P055889
  • GC11P055870
  • GC11P056113

Summaries for OR8K1 Gene

Entrez Gene Summary for OR8K1 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8K1 Gene

OR8K1 (Olfactory Receptor Family 8 Subfamily K Member 1) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory transduction. Gene Ontology (GO) annotations related to this gene include G protein-coupled receptor activity and odorant binding. An important paralog of this gene is OR8K3.

UniProtKB/Swiss-Prot Summary for OR8K1 Gene

Gene Wiki entry for OR8K1 Gene

No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR8K1 Gene

Genomics for OR8K1 Gene

GeneHancer (GH) Regulatory Elements Pubs


Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for OR8K1

Top Transcription factor binding sites by QIAGEN in the OR8K1 gene promoter:
  • AML1a
  • FOXL1
  • Msx-1
  • NF-AT
  • NF-AT1
  • NF-AT2
  • NF-AT3
  • NF-AT4
  • POU6F1 (c2)

Genomic Locations for OR8K1 Gene

Latest Assembly
chr11:56,345,945-56,347,031
(GRCh38/hg38)
Size:
1,087 bases
Orientation:
Plus strand

Previous Assembly
chr11:56,113,515-56,114,474
(GRCh37/hg19 by Entrez Gene)
Size:
960 bases
Orientation:
Plus strand

chr11:56,113,421-56,114,507
(GRCh37/hg19 by Ensembl)
Size:
1,087 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr11(ALT_REF_LOCI_1):156,788-157,747 (+)

Genomic View for OR8K1 Gene

Genes around OR8K1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8K1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8K1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR8K1 Gene

Proteins for OR8K1 Gene

  • Protein details for OR8K1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGG5-OR8K1_HUMAN
    Recommended name:
    Olfactory receptor 8K1
    Protein Accession:
    Q8NGG5
    Secondary Accessions:
    • B9EJB1
    • Q6IFC3
    • Q96RC1

    Protein attributes for OR8K1 Gene

    Size:
    319 amino acids
    Molecular mass:
    36581 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR8K1 Gene

Post-translational modifications for OR8K1 Gene

  • Glycosylation at Asn8

Other Protein References for OR8K1 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR8K1 Gene

Domains & Families for OR8K1 Gene

Gene Families for OR8K1 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR8K1 Gene

InterPro:
Blocks:
  • Olfactory receptor signature

Suggested Antigen Peptide Sequences for OR8K1 Gene

GenScript: Design optimal peptide antigens:
  • Olfactory receptor OR11-182 (OR8K1_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q8NGG5

UniProtKB/Swiss-Prot:

OR8K1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR8K1: view

Function for OR8K1 Gene

Molecular function for OR8K1 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR8K1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA 21873635
GO:0005549 odorant binding IBA 21873635
genes like me logo Genes that share ontologies with OR8K1: view

Phenotypes for OR8K1 Gene

genes like me logo Genes that share phenotypes with OR8K1: view

Animal Models for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR8K1

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8K1 Gene

Localization for OR8K1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR8K1 Gene

Cell membrane. Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR8K1 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR8K1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR8K1: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR8K1 Gene

Pathways & Interactions for OR8K1 Gene

genes like me logo Genes that share pathways with OR8K1: view

Pathways by source for OR8K1 Gene

Interacting Proteins for OR8K1 Gene

Gene Ontology (GO) - Biological Process for OR8K1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G protein-coupled receptor signaling pathway IBA 21873635
GO:0007608 sensory perception of smell IBA 21873635
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR8K1: view

No data available for SIGNOR curated interactions for OR8K1 Gene

Drugs & Compounds for OR8K1 Gene

No Compound Related Data Available

Transcripts for OR8K1 Gene

mRNA/cDNA for OR8K1 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR8K1

Alternative Splicing Database (ASD) splice patterns (SP) for OR8K1 Gene

No ASD Table

Relevant External Links for OR8K1 Gene

GeneLoc Exon Structure for
OR8K1

Expression for OR8K1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR8K1 Gene

Protein differential expression in normal tissues from HIPED for OR8K1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for OR8K1 Gene



Protein tissue co-expression partners for OR8K1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OR8K1

SOURCE GeneReport for Unigene cluster for OR8K1 Gene:

Hs.553748
genes like me logo Genes that share expression patterns with OR8K1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8K1 Gene

Orthologs for OR8K1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR8K1 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC747630 29
  • 98.62 (n)
OR8K1 30
  • 97 (a)
OneToOne
Dog
(Canis familiaris)
Mammalia LOC100684411 29
  • 86.21 (n)
OR08B10 30
  • 85 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia LOC513114 29
  • 85.74 (n)
-- 30
  • 85 (a)
OneToMany
-- 30
  • 85 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Or8k1 45 Olfr1046 29 16 30
  • 80.02 (n)
OneToOne
Or8k19-ps 45 Olfr1050-ps1
  • chr2:86,267,882-86,268,825
Rat
(Rattus norvegicus)
Mammalia Olr485 29
  • 79.66 (n)
Species where no ortholog for OR8K1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR8K1 Gene

ENSEMBL:
Gene Tree for OR8K1 (if available)
TreeFam:
Gene Tree for OR8K1 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for OR8K1: view image
Alliance of Genome Resources:
Additional Orthologs for OR8K1

Paralogs for OR8K1 Gene

(448) SIMAP similar genes for OR8K1 Gene using alignment to 1 proteins:

  • OR8K1_HUMAN
genes like me logo Genes that share paralogs with OR8K1: view

Variants for OR8K1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for OR8K1 Gene

SNP ID Clinical significance and condition Chr 11 pos Variation AA Info Type
rs10896271 -- p.Met21Val
rs10896272 -- p.Pro27Thr
rs17614327 -- p.Ala84Thr

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for OR8K1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for OR8K1 Gene

Variant ID Type Subtype PubMed ID
dgv1948n54 CNV loss 21841781
esv3579724 CNV loss 25503493
esv3892014 CNV loss 25118596
nsv832161 CNV gain 17160897

Variation tolerance for OR8K1 Gene

Residual Variation Intolerance Score: 93.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 13.67; 95.70% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for OR8K1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8K1
Leiden Open Variation Database (LOVD)
OR8K1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR8K1 Gene

Disorders for OR8K1 Gene

Additional Disease Information for OR8K1

No disorders were found for OR8K1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR8K1 Gene

Publications for OR8K1 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4
  2. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 4
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for OR8K1 Gene

Sources for OR8K1 Gene