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OR8G2P Gene(Pseudogene)

Olfactory Receptor Family 8 Subfamily G Member 2 Pseudogene

GCID:
GC11P124226
GIFtS:
26
Genes Participants
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Aliases for OR8G2P Gene

Aliases for OR8G2P Gene

  • Olfactory Receptor Family 8 Subfamily G Member 2 Pseudogene 2 3 5
  • Olfactory Receptor, Family 8, Subfamily G, Member 2 2 3
  • Olfactory Receptor OR11-292 3 4
  • Olfactory Receptor TPCR120 3 4
  • Olfactory Receptor 8G4 3 4
  • OR8G2 3 4
  • OR8G4 3 4
  • Olfactory Receptor, Family 8, Subfamily G, Member 2 Pseudogene 2
  • Olfactory Receptor, Family 8, Subfamily G, Member 4 3
  • Olfactory Receptor Family 8 Subfamily G Member 2 2
  • Seven Transmembrane Helix Receptor 3
  • Putative Olfactory Receptor 8G2 3
  • Olfactory Receptor OR11-297 3
  • HSTPCR120 3
  • TPCR120 3
  • ORL206 3
  • ORL486 3

External Ids for OR8G2P Gene

Previous HGNC Symbols for OR8G2P Gene

  • OR8G4
  • OR8G2

Summaries for OR8G2P Gene

Entrez Gene Summary for OR8G2P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8G2P Gene

OR8G2P (Olfactory Receptor Family 8 Subfamily G Member 2 Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway.

UniProtKB/Swiss-Prot for OR8G2P Gene

  • Odorant receptor.

Gene Wiki entry for OR8G2P Gene

Additional gene information for OR8G2P Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR8G2P Gene

Genomics for OR8G2P Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for OR8G2P Gene

Promoters and enhancers for OR8G2P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11I124224 Enhancer 1 ENCODE 550.8 +0.5 461 1.1 HDGF PKNOX1 ATF1 ARNT TCF12 POLR2B ZNF766 E2F8 ATF7 CAVIN1 GC11P124227 OR8G2P VWA5A MSANTD2 ZNF202 TMEM218 ENSG00000254509 LOC102724410
GH11I123740 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 6.8 -482.6 -482566 3.8 HNRNPUL1 PKNOX1 ARNT MLX ARID4B SIN3A DMAP1 YY1 POLR2B E2F8 ZNF202 CLMP OR6X1 OR10G7 OR6M1 OR10G4 OR8G2P OR4D5 TMEM225 OR6T1
GH11I124070 Enhancer 1.2 FANTOM5 Ensembl ENCODE 2.3 -153.5 -153455 0.9 PKNOX1 BMI1 BATF IRF4 RAD21 CHAMP1 ARID2 ZNF143 ATF7 ETV6 VWA5A OR8B12 OR8G2P GC11M124060 LOC105369545
GH11I124275 Enhancer 1.2 FANTOM5 ENCODE 2.1 +51.8 51762 1.3 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 ATF7 CAVIN1 NCOA1 ZNF592 VWA5A OR8D1 OR8G5 OR8G2P TBRG1 OR8B12 SLC5A4P1
GH11I124078 Enhancer 1.2 FANTOM5 ENCODE 1.8 -144.6 -144589 3.3 HDGF PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 CAVIN1 VWA5A ZNF202 SPA17 OR8G2P OR8B12 OR8D1 OR8A1 LOC105369545 GC11M124060
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OR8G2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR8G2P Gene

Genomic Locations for OR8G2P Gene
chr11:124,224,639-124,225,678
(GRCh38/hg38)
Size:
1,040 bases
Orientation:
Plus strand
chr11:124,095,398-124,096,365
(GRCh37/hg19)

Genomic View for OR8G2P Gene

Genes around OR8G2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8G2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8G2P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR8G2P Gene

Proteins for OR8G2P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for OR8G2P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6IF36-O8G2P_HUMAN
    Recommended name:
    Putative olfactory receptor 8G2
    Protein Accession:
    Q6IF36
    Secondary Accessions:
    • Q15614
    • Q6IF38

    Protein attributes for OR8G2P Gene

    Size:
    304 amino acids
    Molecular mass:
    33950 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR8G2P Gene

Post-translational modifications for OR8G2P Gene

No Post-translational modifications

Other Protein References for OR8G2P Gene

REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR8G2P Gene

Domains & Families for OR8G2P Gene

Gene Families for OR8G2P Gene

HGNC:

Protein Domains for OR8G2P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for OR8G2P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6IF36

UniProtKB/Swiss-Prot:

O8G2P_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR8G2P: view

Function for OR8G2P Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for OR8G2P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR8G2P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
GO:0005549 odorant binding IBA --
genes like me logo Genes that share ontologies with OR8G2P: view

Phenotypes for OR8G2P Gene

GenomeRNAi human phenotypes for OR8G2P:
genes like me logo Genes that share phenotypes with OR8G2P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8G2P Gene

Localization for OR8G2P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR8G2P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR8G2P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR8G2P: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OR8G2P Gene

Pathways & Interactions for OR8G2P Gene

genes like me logo Genes that share pathways with OR8G2P: view

Pathways by source for OR8G2P Gene

1 BioSystems pathway for OR8G2P Gene
1 KEGG pathway for OR8G2P Gene

Interacting Proteins for OR8G2P Gene

Gene Ontology (GO) - Biological Process for OR8G2P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway TAS --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR8G2P: view

No data available for SIGNOR curated interactions for OR8G2P Gene

Drugs & Compounds for OR8G2P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for OR8G2P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for OR8G2P Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR8G2P Gene

No ASD Table

Relevant External Links for OR8G2P Gene

GeneLoc Exon Structure for
OR8G2P
ECgene alternative splicing isoforms for
OR8G2P

Expression for OR8G2P Gene

Products:

  1. Primer

NURSA nuclear receptor signaling pathways regulating expression of OR8G2P Gene:

OR8G2P
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8G2P Gene

Orthologs for OR8G2P Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR8G2P Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
 Mammalia LOC100687661 33
  • 86.64 (n)
cow
(Bos Taurus)
 Mammalia LOC513062 33
  • 85.48 (n)
mouse
(Mus musculus)
 Mammalia Or8g2 51 Olfr229 33 16
  • 83.51 (n)
Or8g20 51 Olfr44
  • chr9:39,484,310-39,485,251
Or8g23 51 Olfr937
  • chr9:39,059,732-39,060,664
Or8g24 51 Olfr938
  • chr9:39,077,799-39,078,743
Or8g2b 51 Olfr971
  • chr9:39,839,436-39,840,356
Or8g30 51 Olfr948
  • chr9:39,318,650-39,319,612
Or8g33 51 Olfr952
  • chr9:39,426,128-39,427,069
Or8g35 51 Olfr955
  • chr9:39,469,783-39,470,724
Or8g36 51 Olfr957
  • chr9:39,510,786-39,511,718
Or8g37 51 Olfr970
  • chr9:39,819,641-39,820,573
Species where no ortholog for OR8G2P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR8G2P Gene

ENSEMBL:
Gene Tree for OR8G2P (if available)
TreeFam:
Gene Tree for OR8G2P (if available)

Paralogs for OR8G2P Gene

No data available for Paralogs for OR8G2P Gene

Variants for OR8G2P Gene

Sequence variations from dbSNP and Humsavar for OR8G2P Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1004772876 -- 124,224,588(+) A/G upstream_transcript_variant
rs1004840429 -- 124,225,933(+) C/T downstream_transcript_variant
rs1004957791 -- 124,224,315(+) T/A upstream_transcript_variant
rs1005285322 -- 124,224,235(+) C/A upstream_transcript_variant
rs1006218029 -- 124,222,864(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for OR8G2P Gene

Variant ID Type Subtype PubMed ID
dgv57n111 CNV duplication 26073780
dgv82n21 CNV gain 19592680
esv2745180 CNV deletion 23290073
esv2745181 CNV deletion 23290073
esv3627973 CNV gain 21293372
nsv442245 CNV gain 18776908
nsv826110 CNV gain 20364138
nsv975237 CNV duplication 23825009

Additional Variant Information for OR8G2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8G2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OR8G2P Gene

Disorders for OR8G2P Gene

Additional Disease Information for OR8G2P

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for OR8G2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR8G2P Gene

Publications for OR8G2P Gene

  1. Specific repertoire of olfactory receptor genes in the male germ cells of several mammalian species. (PMID: 9119360) Vanderhaeghen P … Parmentier M (Genomics 1997) 2 3 4 58
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 58
  3. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4 58
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for OR8G2P Gene

Sources for OR8G2P Gene

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