OR8C1P Gene (Pseudogene)

Olfactory Receptor Family 8 Subfamily C Member 1 Pseudogene

GC11M124376
GIFtS:
6
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR8C1P Gene

Aliases for OR8C1P Gene

  • Olfactory Receptor Family 8 Subfamily C Member 1 Pseudogene 2 3 5
  • OR912-106 2 3
  • OR11-175 2 3
  • OR912-45 2 3
  • Olfactory Receptor, Family 8, Subfamily C, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 8, Subfamily C, Member 3 Pseudogene 3
  • Olfactory Receptor, Family 8, Subfamily C, Member 4 Pseudogene 3
  • OR8C3P 3
  • OR8C4P 3
  • OR8C1P 5

External Ids for OR8C1P Gene

Previous HGNC Symbols for OR8C1P Gene

  • OR8C3P
  • OR8C4P

Previous GeneCards Identifiers for OR8C1P Gene

  • GC11U990164
  • GC11M123784
  • GC11M123751
  • GC11M124246

Summaries for OR8C1P Gene

Entrez Gene Summary for OR8C1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8C1P Gene

OR8C1P (Olfactory Receptor Family 8 Subfamily C Member 1 Pseudogene) is a Pseudogene.

Additional gene information for OR8C1P Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR8C1P Gene

Genomics for OR8C1P Gene

Genomic Locations for OR8C1P Gene

Latest Assembly
chr11:124,376,877-124,377,807
(GRCh38/hg38)
Size:
931 bases
Orientation:
Minus strand

Previous Assembly
chr11:124,246,837-124,247,511
(GRCh37/hg19 by Entrez Gene)
Size:
675 bases
Orientation:
Minus strand

chr11:124,246,773-124,247,697
(GRCh37/hg19 by Ensembl)
Size:
925 bases
Orientation:
Minus strand

Genomic View for OR8C1P Gene

Genes around OR8C1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8C1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8C1P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR8C1P Gene

No data available for GeneHancer (GH) Regulatory Elements for OR8C1P Gene

Proteins for OR8C1P Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for OR8C1P Gene

No Post-translational modifications

Other Protein References for OR8C1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR8C1P Gene

Domains & Families for OR8C1P Gene

Gene Families for OR8C1P Gene

HGNC:
genes like me logo Genes that share domains with OR8C1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OR8C1P Gene

Function for OR8C1P Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Molecular function for OR8C1P Gene

GENATLAS Biochemistry:
olfactory receptor,family 8,subfamily C,member 1,pseudogene,G protein coupled receptor superfamily

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8C1P Gene

Localization for OR8C1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR8C1P Gene

Pathways & Interactions for OR8C1P Gene

PathCards logo

SuperPathways for OR8C1P Gene

No Data Available

Gene Ontology (GO) - Biological Process for OR8C1P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OR8C1P Gene

Drugs & Compounds for OR8C1P Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for OR8C1P Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
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mRNA/cDNA for OR8C1P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR8C1P Gene

No ASD Table

Relevant External Links for OR8C1P Gene

GeneLoc Exon Structure for
OR8C1P

Expression for OR8C1P Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR8C1P Gene

mRNA expression in normal human tissues for OR8C1P Gene
mRNA expression by GTEx for OR8C1P Gene
genes like me logo Genes that share expression patterns with OR8C1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8C1P Gene

Orthologs for OR8C1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR8C1P Gene

Organism Taxonomy Gene Similarity Type Details
Mouse
(Mus musculus)
 Mammalia Or8c10 46 Olfr250
  • chr9:38,367,548-38,368,540
Or8c11 46 Olfr251
  • chr9:38,377,883-38,378,830
Or8c13 46 Olfr891
  • chr9:38,179,874-38,180,821
Or8c14-ps 46 Olfr892-ps1
  • chr9:38,189,721-38,190,655
Or8c15 46 Olfr893
  • chr9:38,208,935-38,209,990
Or8c16 46 Olfr894
  • chr9:38,218,825-38,219,763
Or8c17 46 Olfr895
  • chr9:38,268,515-38,269,462
Or8c18 46 Olfr896
  • chr9:38,291,947-38,292,870
Or8c19-ps 46 Olfr897-ps1
  • chr9:38,308,788-38,309,728
Or8c20 46 Olfr898
  • chr9:38,349,085-38,350,032
Or8c8 46 Olfr143
  • chr9:38,253,419-38,254,357
Or8c9 46 Olfr25
  • chr9:38,329,589-38,330,527
Species where no ortholog for OR8C1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR8C1P Gene

ENSEMBL:
Gene Tree for OR8C1P (if available)
TreeFam:
Gene Tree for OR8C1P (if available)

Paralogs for OR8C1P Gene

No data available for Paralogs for OR8C1P Gene

Variants for OR8C1P Gene

Additional Variant Information for OR8C1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8C1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR8C1P Gene

Disorders for OR8C1P Gene

No disorders were found for OR8C1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR8C1P Gene

Publications for OR8C1P Gene

  1. Organization and evolution of olfactory receptor genes on human chromosome 11. (PMID: 9787077) Buettner JA … Evans GA (Genomics 1998) 2 3
  2. Distribution of olfactory receptor genes in the human genome. (PMID: 9500546) Rouquier S … Giorgi D (Nature genetics 1998) 3

ExternalLinks

View latest publications for OR8C1P gene in Mastermind

Products for OR8C1P Gene

Sources for OR8C1P Gene