OR8B9P Gene (Pseudogene)

Olfactory Receptor Family 8 Subfamily B Member 9 Pseudogene

GC11M124480
GIFtS:
6
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR8B9P Gene

Aliases for OR8B9P Gene

  • Olfactory Receptor Family 8 Subfamily B Member 9 Pseudogene 2 3 5
  • Olfactory Receptor, Family 8, Subfamily B, Member 9 Pseudogene 2
  • OR8B9P 5

External Ids for OR8B9P Gene

Previous GeneCards Identifiers for OR8B9P Gene

  • GC11U990318
  • GC11M124384
  • GC11M123888
  • GC11M123856

Summaries for OR8B9P Gene

Entrez Gene Summary for OR8B9P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8B9P Gene

OR8B9P (Olfactory Receptor Family 8 Subfamily B Member 9 Pseudogene) is a Pseudogene.

Additional gene information for OR8B9P Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR8B9P Gene

Genomics for OR8B9P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for OR8B9P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J124481 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 +1.1 1069 1.2 IKZF1 PKNOX1 ZNF740 DPF2 SOX6 UBTF ZNF184 ZNF766 HMBOX1 POLR2A OR8B9P OR8B8 OR8B10P HSALNG0087888 OR8B12
GH11J124482 Enhancer 0.5 ENCODE 600.7 +0.2 226 0.1 PKNOX1 ZNF740 NFE2 ZNF316 MAFG ATF3 FOS CBFA2T3 MAFK OR8B9P OR8B8 HSALNG0087888 OR8B12
GH11J124511 Enhancer 0.5 Ensembl 0.3 -29.1 -29131 0.4 ZNF316 MAFG MAFK MAFF EMSY OR8B8 OR8B4 piR-32097 OR8B9P OR8B12
GH11J124473 Enhancer 0.3 Ensembl 0.4 +8.7 8669 0.8 SPI1 OR8B10P SPA17 HSALNG0087888 OR8B9P OR8B8 OR8B12
GH11J124500 Enhancer 0.2 Ensembl 0.4 -18.1 -18131 0.4 OR8B10P OR8B8 piR-32097 OR8B9P OR8B12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR8B9P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OR8B9P Gene

Genomic Locations for OR8B9P Gene
chr11:124,476,963-124,482,870
(GRCh38/hg38)
Size:
5,908 bases
Orientation:
Minus strand
chr11:124,350,895-124,351,824
(GRCh37/hg19)
Size:
930 bases
Orientation:
Minus strand

Genomic View for OR8B9P Gene

Genes around OR8B9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8B9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8B9P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR8B9P Gene

Proteins for OR8B9P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for OR8B9P Gene

No Post-translational modifications

Other Protein References for OR8B9P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR8B9P Gene

Domains & Families for OR8B9P Gene

Gene Families for OR8B9P Gene

HGNC:
genes like me logo Genes that share domains with OR8B9P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OR8B9P Gene

Function for OR8B9P Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for OR8B9P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8B9P Gene

Localization for OR8B9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR8B9P Gene

Pathways & Interactions for OR8B9P Gene

PathCards logo

SuperPathways for OR8B9P Gene

No Data Available

Gene Ontology (GO) - Biological Process for OR8B9P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OR8B9P Gene

Drugs & Compounds for OR8B9P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for OR8B9P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for OR8B9P Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR8B9P Gene

No ASD Table

Relevant External Links for OR8B9P Gene

GeneLoc Exon Structure for
OR8B9P

Expression for OR8B9P Gene

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  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR8B9P Gene

mRNA expression in normal human tissues for OR8B9P Gene
mRNA expression by GTEx for OR8B9P Gene
genes like me logo Genes that share expression patterns with OR8B9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8B9P Gene

Orthologs for OR8B9P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR8B9P Gene

Organism Taxonomy Gene Similarity Type Details
Mouse
(Mus musculus)
 Mammalia Or8b9 46 Olfr877
  • chr9:37,854,820-37,855,752
Species where no ortholog for OR8B9P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR8B9P Gene

ENSEMBL:
Gene Tree for OR8B9P (if available)
TreeFam:
Gene Tree for OR8B9P (if available)

Paralogs for OR8B9P Gene

No data available for Paralogs for OR8B9P Gene

Variants for OR8B9P Gene

Additional Variant Information for OR8B9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8B9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR8B9P Gene

Disorders for OR8B9P Gene

No disorders were found for OR8B9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR8B9P Gene

Publications for OR8B9P Gene

  1. The olfactory receptor gene repertoire in primates and mouse: evidence for reduction of the functional fraction in primates. (PMID: 10706615) Rouquier S … Giorgi D (Proceedings of the National Academy of Sciences of the United States of America 2000) 3

ExternalLinks

View latest publications for OR8B9P gene in Mastermind

Products for OR8B9P Gene

Sources for OR8B9P Gene