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Aliases for OR7E47P Gene

Aliases for OR7E47P Gene

  • Olfactory Receptor Family 7 Subfamily E Member 47 Pseudogene 2 3 5
  • Olfactory Receptor, Family 7, Subfamily E, Member 47 Pseudogene 2
  • OR7E141 3

External Ids for OR7E47P Gene

Previous GeneCards Identifiers for OR7E47P Gene

  • GC00U990594
  • GC12U900021
  • GC12P052190
  • GC12P050787
  • GC12P052475
  • GC12P052501
  • GC12P052477

Summaries for OR7E47P Gene

GeneCards Summary for OR7E47P Gene

OR7E47P (Olfactory Receptor Family 7 Subfamily E Member 47 Pseudogene) is a Pseudogene.

Additional gene information for OR7E47P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR7E47P Gene

Genomics for OR7E47P Gene

GeneHancer (GH) Regulatory Elements for OR7E47P Gene

Promoters and enhancers for OR7E47P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J052078 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 610.6 +1.9 1947 4.1 CC2D1A CTCF CEBPG SP7 SP1 SP5 ZNF384 EGR1 RAD21 IKZF1 OR7E47P SMIM41 ENSG00000257663 NR4A1 GRASP ENSG00000257989 EIF4B KRT6C
GH12J052049 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.3 -27.2 -27157 6.5 ZNF652 ZFX SP1 ZNF148 NKRF POLR2A ZNF687 TFE3 NCOA6 ZBTB7A NR4A1 HNRNPA3P10 EIF4B OR7E47P KRT6C ENSG00000259884
GH12J052068 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.9 -9.3 -9295 3.2 SP1 CC2D1A ELF3 CTCF MNT SIX5 ZNF148 NKRF MLLT1 POLR2A ATG101 HNRNPA3P10 EIF4B TFCP2 OR7E47P KRT6C SMIM41
GH12J052060 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -16.3 -16327 4.9 AHR HNF1A SP5 ZNF644 IKZF1 SOX13 ZIC2 ATF1 ZNF341 BRCA1 OR7E47P KRT6C ENSG00000259884 ATG101
GH12J052041 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 7.1 -35.3 -35267 6.8 ZNF148 ZNF687 MAFK SP1 MLLT1 IKZF1 ZNF600 IKZF2 ZNF143 REST NR4A1 OR7E47P ENSG00000261586 GRASP ACVR1B ENSG00000259884
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR7E47P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR7E47P Gene

Genomic Locations for OR7E47P Gene
chr12:52,079,696-52,108,319
(GRCh38/hg38)
Size:
28,624 bases
Orientation:
Plus strand
chr12:52,473,480-52,502,047
(GRCh37/hg19)
Size:
28,568 bases
Orientation:
Plus strand

Genomic View for OR7E47P Gene

Genes around OR7E47P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR7E47P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR7E47P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR7E47P Gene

Proteins for OR7E47P Gene

Post-translational modifications for OR7E47P Gene

No Post-translational modifications

Other Protein References for OR7E47P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR7E47P Gene

Domains & Families for OR7E47P Gene

Gene Families for OR7E47P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR7E47P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR7E47P Gene

Function for OR7E47P Gene

Phenotypes From GWAS Catalog for OR7E47P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR7E47P Gene

Localization for OR7E47P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR7E47P Gene

Pathways & Interactions for OR7E47P Gene

PathCards logo

SuperPathways for OR7E47P Gene

No Data Available

Interacting Proteins for OR7E47P Gene

Gene Ontology (GO) - Biological Process for OR7E47P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR7E47P Gene

Drugs & Compounds for OR7E47P Gene

No Compound Related Data Available

Transcripts for OR7E47P Gene

mRNA/cDNA for OR7E47P Gene

Unigene Clusters for OR7E47P Gene

Olfactory receptor, family 7, subfamily E, member 47 pseudogene:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR7E47P Gene

No ASD Table

Relevant External Links for OR7E47P Gene

GeneLoc Exon Structure for
OR7E47P
ECgene alternative splicing isoforms for
OR7E47P

Expression for OR7E47P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR7E47P Gene

mRNA differential expression in normal tissues according to GTEx for OR7E47P Gene

This gene is overexpressed in Lung (x9.6), Nerve - Tibial (x7.0), and Prostate (x6.3).

NURSA nuclear receptor signaling pathways regulating expression of OR7E47P Gene:

OR7E47P

SOURCE GeneReport for Unigene cluster for OR7E47P Gene:

Hs.524431
genes like me logo Genes that share expression patterns with OR7E47P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR7E47P Gene

Orthologs for OR7E47P Gene

Evolution for OR7E47P Gene

ENSEMBL:
Gene Tree for OR7E47P (if available)
TreeFam:
Gene Tree for OR7E47P (if available)

No data available for Orthologs for OR7E47P Gene

Paralogs for OR7E47P Gene

No data available for Paralogs for OR7E47P Gene

Variants for OR7E47P Gene

Sequence variations from dbSNP and Humsavar for OR7E47P Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000047042 -- 52,086,991(+) G/C genic_upstream_transcript_variant, intron_variant
rs1000101739 -- 52,083,672(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000401001 -- 52,087,702(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000424604 -- 52,094,901(+) C/A genic_downstream_transcript_variant, intron_variant
rs1000524517 -- 52,080,781(+) G/C genic_upstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for OR7E47P Gene

Variant ID Type Subtype PubMed ID
nsv1078338 CNV duplication 25765185
nsv1113482 CNV deletion 24896259
nsv470292 CNV loss 18288195
nsv558898 CNV loss 21841781
nsv832409 CNV loss 17160897
nsv983324 CNV duplication 23825009

Additional Variant Information for OR7E47P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR7E47P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OR7E47P Gene

Disorders for OR7E47P Gene

Additional Disease Information for OR7E47P

No disorders were found for OR7E47P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR7E47P Gene

Publications for OR7E47P Gene

  1. Olfactory receptor-encoding genes and pseudogenes are expressed in humans. (PMID: 8647456) Crowe ML … Connerton IF (Gene 1996) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for OR7E47P Gene

Sources for OR7E47P Gene

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