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Aliases for OR7E28P Gene

Subcategory (RNA class) for OR7E28P Gene

lncRNA

Aliases for OR7E28P Gene

  • Olfactory Receptor Family 7 Subfamily E Member 28 Pseudogene 2 3 5
  • Olfactory Receptor, Family 7, Subfamily E, Member 107 Pseudogene 3
  • Olfactory Receptor, Family 7, Subfamily E, Member 133 Pseudogene 3
  • Olfactory Receptor, Family 7, Subfamily E, Member 28 Pseudogene 2
  • Olfactory Receptor, Family 7, Subfamily E, Member 27 Pseudogene 3
  • OR7E107P 3
  • OR7E133P 3
  • OR7E27P 3
  • OST128 3
  • Hg616 3

External Ids for OR7E28P Gene

ORGUL Members for OR7E28P Gene

Previous HGNC Symbols for OR7E28P Gene

  • OR7E133P
  • OR7E107P
  • OR7E27P

Previous GeneCards Identifiers for OR7E28P Gene

  • GC00U990604
  • GC02U900710
  • GC02P159544
  • GC02P159427
  • GC02P159719

Summaries for OR7E28P Gene

Entrez Gene Summary for OR7E28P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR7E28P Gene

OR7E28P (Olfactory Receptor Family 7 Subfamily E Member 28 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for OR7E28P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR7E28P Gene

Genomics for OR7E28P Gene

GeneHancer (GH) Regulatory Elements for OR7E28P Gene

Promoters and enhancers for OR7E28P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I158456 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 7.2 -404.3 -404275 3.6 HDGF FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 PKP4 CCDC148 OR7E28P ENSG00000228586 RPL7AP22
GH02I158781 Enhancer 0.7 Ensembl ENCODE 17.6 -80.4 -80426 1.3 ZNF316 BACH1 MAFG NFE2 MAFK EMSY OR7E28P DAPL1 GC02M158745
GH02I158966 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 5.8 +106.8 106755 5.5 PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF48 YY1 GLIS2 SP5 TANC1 OR7E28P GC02P158993
GH02I158745 Enhancer 0.8 Ensembl ENCODE 14.8 -116.8 -116827 0.8 CTCF TFAP4 ZNF654 SIN3A REST ZNF48 RAD21 GATA3 POLR2A ZNF143 GC02M158745 OR7E28P PKP4-AS1 ENSG00000228586
GH02I158795 Promoter/Enhancer 1 EPDnew Ensembl 11.2 -66.8 -66810 0.6 USF1 POLR2A SCRT2 ZNF223 TCF7L2 DAPL1 OR7E28P OR7E89P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OR7E28P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR7E28P Gene

Genomic Locations for OR7E28P Gene
chr2:158,862,311-158,863,292
(GRCh38/hg38)
Size:
982 bases
Orientation:
Plus strand
chr2:159,718,823-159,719,804
(GRCh37/hg19)

Genomic View for OR7E28P Gene

Genes around OR7E28P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR7E28P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR7E28P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR7E28P Gene

Proteins for OR7E28P Gene

Post-translational modifications for OR7E28P Gene

No Post-translational modifications

Other Protein References for OR7E28P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR7E28P Gene

Domains & Families for OR7E28P Gene

Gene Families for OR7E28P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR7E28P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR7E28P Gene

Function for OR7E28P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR7E28P Gene

Localization for OR7E28P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR7E28P Gene

Pathways & Interactions for OR7E28P Gene

SuperPathways for OR7E28P Gene

No Data Available

Interacting Proteins for OR7E28P Gene

Gene Ontology (GO) - Biological Process for OR7E28P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR7E28P Gene

Drugs & Compounds for OR7E28P Gene

No Compound Related Data Available

Transcripts for OR7E28P Gene

mRNA/cDNA for OR7E28P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR7E28P Gene

No ASD Table

Relevant External Links for OR7E28P Gene

GeneLoc Exon Structure for
OR7E28P
ECgene alternative splicing isoforms for
OR7E28P

Expression for OR7E28P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR7E28P Gene

mRNA differential expression in normal tissues according to GTEx for OR7E28P Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x15.0), Skin - Not Sun Exposed (Suprapubic) (x11.3), and Esophagus - Mucosa (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of OR7E28P Gene:

OR7E28P
genes like me logo Genes that share expression patterns with OR7E28P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR7E28P Gene

Orthologs for OR7E28P Gene

Evolution for OR7E28P Gene

ENSEMBL:
Gene Tree for OR7E28P (if available)
TreeFam:
Gene Tree for OR7E28P (if available)

No data available for Orthologs for OR7E28P Gene

Paralogs for OR7E28P Gene

No data available for Paralogs for OR7E28P Gene

Variants for OR7E28P Gene

Additional Variant Information for OR7E28P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR7E28P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR7E28P Gene

Disorders for OR7E28P Gene

Additional Disease Information for OR7E28P

Genetic Association Database
(GAD)

No disorders were found for OR7E28P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR7E28P Gene

Publications for OR7E28P Gene

  1. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 44 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for OR7E28P Gene

Sources for OR7E28P Gene

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