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Aliases for OR6D1P Gene

Aliases for OR6D1P Gene

  • Olfactory Receptor Family 6 Subfamily D Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 6, Subfamily D, Member 2 Pseudogene 3
  • Olfactory Receptor, Family 6, Subfamily D, Member 1 Pseudogene 2
  • OR6D2P 3

External Ids for OR6D1P Gene

Previous GeneCards Identifiers for OR6D1P Gene

  • GC10U990105
  • GC10P045039
  • GC10P045073
  • GC10P045754

Summaries for OR6D1P Gene

Entrez Gene Summary for OR6D1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR6D1P Gene

OR6D1P (Olfactory Receptor Family 6 Subfamily D Member 1 Pseudogene) is a Pseudogene.

Additional gene information for OR6D1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR6D1P Gene

Genomics for OR6D1P Gene

GeneHancer (GH) Regulatory Elements for OR6D1P Gene

Promoters and enhancers for OR6D1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045253 Enhancer 0.5 Ensembl 600.7 -1.9 -1939 1.4 RELA RUNX3 BCL11A JUNB BATF KDM1A OR6D1P LOC102724323 ENSG00000227683 OR13A1 AGAP4 CUBNP2
GH10J045255 Enhancer 0.4 Ensembl 600.7 +1.6 1561 3.6 MZF1 FOXA2 IKZF1 OR6D1P PIR41722 LOC102724323 ZFAND4 MARCH8 AGAP4 AGAP10P
GH10J045249 Enhancer 0.9 ENCODE 0.4 -5.3 -5265 0.9 ZNF384 CTCF SP7 ZNF680 RAD21 IKZF1 RFX1 ZNF600 PRDM10 ZNF512 AGAP4 ALOX5 CUBNP2 OR6D1P
GH10J045261 Enhancer 0.8 ENCODE 0.4 +6.4 6434 1 CBFA2T2 TRIM24 SMARCA4 DPF2 IKZF1 LEF1 HDAC1 MTA2 NR2C1 SOX6 MARCH8 PIR41722 OR6D1P GC10M045298
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR6D1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR6D1P Gene

Genomic Locations for OR6D1P Gene
chr10:45,255,640-45,263,252
(GRCh38/hg38)
Size:
7,613 bases
Orientation:
Plus strand
chr10:45,753,633-45,754,571
(GRCh37/hg19)
Size:
939 bases
Orientation:
Plus strand

Genomic View for OR6D1P Gene

Genes around OR6D1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR6D1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR6D1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR6D1P Gene

Proteins for OR6D1P Gene

Post-translational modifications for OR6D1P Gene

No Post-translational modifications

Other Protein References for OR6D1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR6D1P Gene

Domains & Families for OR6D1P Gene

Gene Families for OR6D1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR6D1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR6D1P Gene

Function for OR6D1P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR6D1P Gene

Localization for OR6D1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR6D1P Gene

Pathways & Interactions for OR6D1P Gene

PathCards logo

SuperPathways for OR6D1P Gene

No Data Available

Interacting Proteins for OR6D1P Gene

Gene Ontology (GO) - Biological Process for OR6D1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR6D1P Gene

Drugs & Compounds for OR6D1P Gene

No Compound Related Data Available

Transcripts for OR6D1P Gene

mRNA/cDNA for OR6D1P Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR6D1P Gene

No ASD Table

Relevant External Links for OR6D1P Gene

GeneLoc Exon Structure for
OR6D1P
ECgene alternative splicing isoforms for
OR6D1P

Expression for OR6D1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR6D1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR6D1P Gene:

OR6D1P
genes like me logo Genes that share expression patterns with OR6D1P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR6D1P Gene

Orthologs for OR6D1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR6D1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or6d12 51 Olfr212
  • chr6:116,515,779-116,516,759
Or6d13 51 Olfr213
  • chr6:116,540,359-116,541,435
Or6d14 51 Olfr214
  • chr6:116,556,427-116,557,386
Or6d15 51 Olfr215
  • chr6:116,582,015-116,582,944
Species where no ortholog for OR6D1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR6D1P Gene

ENSEMBL:
Gene Tree for OR6D1P (if available)
TreeFam:
Gene Tree for OR6D1P (if available)

Paralogs for OR6D1P Gene

No data available for Paralogs for OR6D1P Gene

Variants for OR6D1P Gene

Additional Variant Information for OR6D1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR6D1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR6D1P Gene

Disorders for OR6D1P Gene

No disorders were found for OR6D1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR6D1P Gene

Publications for OR6D1P Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 58

Products for OR6D1P Gene

Sources for OR6D1P Gene

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