Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR5M11 Gene

Aliases for OR5M11 Gene

  • Olfactory Receptor Family 5 Subfamily M Member 11 2 3 5
  • Olfactory Receptor 5M11 3 4
  • OR11-199 2 3
  • Olfactory Receptor, Family 5, Subfamily M, Member 11 2
  • Olfactory Receptor OR11-199 Pseudogene 3
  • OR5M11 5

External Ids for OR5M11 Gene

Previous GeneCards Identifiers for OR5M11 Gene

  • GC11U990423
  • GC11M056068
  • GC11M056072
  • GC11M056309
  • GC11M056545
  • GC11M057222
  • GC11M057245
  • GC11M057147
  • GC11M059778
  • GC11M056721

Summaries for OR5M11 Gene

Entrez Gene Summary for OR5M11 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5M11 Gene

OR5M11 (Olfactory Receptor Family 5 Subfamily M Member 11) is a Protein Coding gene. Diseases associated with OR5M11 include Noonan Syndrome 10. Among its related pathways are Signaling by GPCR and Olfactory transduction. Gene Ontology (GO) annotations related to this gene include G protein-coupled receptor activity and odorant binding. An important paralog of this gene is OR5M10.

UniProtKB/Swiss-Prot Summary for OR5M11 Gene

Gene Wiki entry for OR5M11 Gene

Additional gene information for OR5M11 Gene

No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR5M11 Gene

Genomics for OR5M11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OR5M11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J056895 Enhancer 0.2 FANTOM5 4.5 -352.5 -352535 0 OR5M10 OR5M9 OR5AP2 OR5M1 OR5M3 OR5AR1 OR5M8 OR5R1 OR5M11 FADS2B
GH11J056533 Enhancer 0.2 ENCODE 0.4 +9.7 9691 0.1 OR5AP2 OR5G5P OR5M11 OR5M5P OR5M8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR5M11 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for OR5M11

Top Transcription factor binding sites by QIAGEN in the OR5M11 gene promoter:
  • AML1a
  • NCX
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Nkx3-1 v3
  • Nkx3-1 v4
  • POU3F2
  • POU3F2 (N-Oct-5a)
  • POU3F2 (N-Oct-5b)

Genomic Locations for OR5M11 Gene

Genomic Locations for OR5M11 Gene
chr11:56,542,262-56,543,281
(GRCh38/hg38)
Size:
1,020 bases
Orientation:
Minus strand
chr11:56,309,746-56,310,757
(GRCh37/hg19)
Size:
1,012 bases
Orientation:
Minus strand

Genomic View for OR5M11 Gene

Genes around OR5M11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5M11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5M11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5M11 Gene

Proteins for OR5M11 Gene

  • Protein details for OR5M11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96RB7-OR5MB_HUMAN
    Recommended name:
    Olfactory receptor 5M11
    Protein Accession:
    Q96RB7
    Secondary Accessions:
    • B2RNL5
    • B2RNL7

    Protein attributes for OR5M11 Gene

    Size:
    305 amino acids
    Molecular mass:
    34450 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR5M11 Gene

Post-translational modifications for OR5M11 Gene

  • Glycosylation at Asn5
  • Modification sites at PhosphoSitePlus

Other Protein References for OR5M11 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR5M11 Gene

Domains & Families for OR5M11 Gene

Gene Families for OR5M11 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR5M11 Gene

InterPro:
Blocks:
  • Olfactory receptor signature
ProtoNet:

Suggested Antigen Peptide Sequences for OR5M11 Gene

GenScript: Design optimal peptide antigens:
  • Olfactory receptor 5M11 (OR5MB_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q96RB7

UniProtKB/Swiss-Prot:

OR5MB_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR5M11: view

Function for OR5M11 Gene

Molecular function for OR5M11 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR5M11 Gene

Gene Ontology (GO) - Molecular Function for OR5M11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
GO:0005549 odorant binding IBA --
genes like me logo Genes that share ontologies with OR5M11: view

Phenotypes for OR5M11 Gene

GenomeRNAi human phenotypes for OR5M11:
genes like me logo Genes that share phenotypes with OR5M11: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR5M11

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5M11 Gene

Localization for OR5M11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR5M11 Gene

Cell membrane. Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR5M11 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR5M11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR5M11: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR5M11 Gene

Pathways & Interactions for OR5M11 Gene

genes like me logo Genes that share pathways with OR5M11: view

Pathways by source for OR5M11 Gene

Interacting Proteins for OR5M11 Gene

Gene Ontology (GO) - Biological Process for OR5M11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G protein-coupled receptor signaling pathway IBA --
GO:0007608 sensory perception of smell IBA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR5M11: view

No data available for SIGNOR curated interactions for OR5M11 Gene

Drugs & Compounds for OR5M11 Gene

No Compound Related Data Available

Transcripts for OR5M11 Gene

mRNA/cDNA for OR5M11 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR5M11

Alternative Splicing Database (ASD) splice patterns (SP) for OR5M11 Gene

No ASD Table

Relevant External Links for OR5M11 Gene

GeneLoc Exon Structure for
OR5M11

Expression for OR5M11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR5M11 Gene

mRNA differential expression in normal tissues according to GTEx for OR5M11 Gene

This gene is overexpressed in Bladder (x22.6) and Testis (x11.8).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OR5M11

SOURCE GeneReport for Unigene cluster for OR5M11 Gene:

Hs.553632
genes like me logo Genes that share expression patterns with OR5M11: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR5M11 Gene

Orthologs for OR5M11 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR5M11 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC741629 30
  • 99.13 (n)
OR5M11 31
  • 97 (a)
OneToOne
Dog
(Canis familiaris)
Mammalia OR5M11 30 31
  • 88.52 (n)
OneToOne
Rat
(Rattus norvegicus)
Mammalia Olr470 30
  • 85.27 (n)
Cow
(Bos Taurus)
Mammalia OR5M11 30 31
  • 85.25 (n)
OneToOne
Mouse
(Mus musculus)
Mammalia Or5m11 46 Olfr1028 30 17 31
  • 85.03 (n)
OneToMany
Or5m11b 46 Olfr1029 17 31
  • 81 (a)
OneToMany
Or5m43-ps 46 Olfr1027-ps1
  • chr2:85,932,145-85,932,945
Oppossum
(Monodelphis domestica)
Mammalia OPOR110 31
  • 84 (a)
OneToMany
-- 31
  • 82 (a)
OneToMany
-- 31
  • 79 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia -- 31
  • 61 (a)
OneToMany
Species where no ortholog for OR5M11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR5M11 Gene

ENSEMBL:
Gene Tree for OR5M11 (if available)
TreeFam:
Gene Tree for OR5M11 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for OR5M11: view image

Paralogs for OR5M11 Gene

(447) SIMAP similar genes for OR5M11 Gene using alignment to 1 proteins:

  • OR5MB_HUMAN

Pseudogenes.org Pseudogenes for OR5M11 Gene

genes like me logo Genes that share paralogs with OR5M11: view

Variants for OR5M11 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for OR5M11 Gene

SNP ID Clinical significance and condition Chr 11 pos Variation AA Info Type
rs17547207 - p.Val280Leu
rs628524 - p.Ser171Asn

Additional dbSNP identifiers (rs#s) for OR5M11 Gene

Structural Variations from Database of Genomic Variants (DGV) for OR5M11 Gene

Variant ID Type Subtype PubMed ID
nsv555099 CNV loss 21841781

Variation tolerance for OR5M11 Gene

Residual Variation Intolerance Score: 88.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.80; 73.71% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for OR5M11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5M11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR5M11 Gene

Disorders for OR5M11 Gene

MalaCards: The human disease database

(1) MalaCards diseases for OR5M11 Gene - From: DISEASES

Disorder Aliases PubMed IDs
noonan syndrome 10
  • ns10
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with OR5M11: view

No data available for UniProtKB/Swiss-Prot and Genatlas for OR5M11 Gene

Publications for OR5M11 Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 4
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
  4. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for OR5M11 Gene

Sources for OR5M11 Gene