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Aliases for OR55B1P Gene

Aliases for OR55B1P Gene

  • Olfactory Receptor Family 55 Subfamily B Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 55, Subfamily B, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 55, Subfamily B, Member 2 Pseudogene 3
  • Olfactory Receptor, Family 55, Subfamily C, Member 1 Pseudogene 3
  • OR55B2P 3
  • OR55C1P 3

External Ids for OR55B1P Gene

Previous HGNC Symbols for OR55B1P Gene

  • OR55B2P
  • OR55C1P

Previous GeneCards Identifiers for OR55B1P Gene

  • GC11U990473
  • GC11M004132
  • GC11M004124

Summaries for OR55B1P Gene

Entrez Gene Summary for OR55B1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR55B1P Gene

OR55B1P (Olfactory Receptor Family 55 Subfamily B Member 1 Pseudogene) is a Pseudogene.

Additional gene information for OR55B1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR55B1P Gene

Genomics for OR55B1P Gene

GeneHancer (GH) Regulatory Elements for OR55B1P Gene

Promoters and enhancers for OR55B1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I004145 Enhancer 0.7 ENCODE 0.8 +4.9 4892 1.4 ATF1 ETV1 TEAD4 ZBTB40 NCOA2 CTBP1 BRD9 EGR1 CBFA2T2 SMARCA5 OR52K2 RRM1 LOC100506082 OR55B1P RRM1-AS1
GH11I004182 Enhancer 0.7 ENCODE 0.3 -31.2 -31172 0.1 BCOR HDGF CTCF RB1 ETV1 MAX RAD21 CTBP1 ZNF143 SMC3 OR52K3P OR52K1 LOC100506082 OR55B1P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OR55B1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR55B1P Gene

Genomic Locations for OR55B1P Gene
chr11:4,146,112-4,151,104
(GRCh38/hg38)
Size:
4,993 bases
Orientation:
Minus strand
chr11:4,167,512-4,168,525
(GRCh37/hg19)

Genomic View for OR55B1P Gene

Genes around OR55B1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR55B1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR55B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR55B1P Gene

Proteins for OR55B1P Gene

Post-translational modifications for OR55B1P Gene

No Post-translational modifications

Other Protein References for OR55B1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR55B1P Gene

Domains & Families for OR55B1P Gene

Gene Families for OR55B1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR55B1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR55B1P Gene

Function for OR55B1P Gene

Phenotypes From GWAS Catalog for OR55B1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR55B1P Gene

Localization for OR55B1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR55B1P Gene

Pathways & Interactions for OR55B1P Gene

SuperPathways for OR55B1P Gene

No Data Available

Interacting Proteins for OR55B1P Gene

Gene Ontology (GO) - Biological Process for OR55B1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR55B1P Gene

Drugs & Compounds for OR55B1P Gene

No Compound Related Data Available

Transcripts for OR55B1P Gene

mRNA/cDNA for OR55B1P Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR55B1P Gene

No ASD Table

Relevant External Links for OR55B1P Gene

GeneLoc Exon Structure for
OR55B1P
ECgene alternative splicing isoforms for
OR55B1P

Expression for OR55B1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR55B1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR55B1P Gene:

OR55B1P
genes like me logo Genes that share expression patterns with OR55B1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR55B1P Gene

Orthologs for OR55B1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR55B1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or55b10 51 Olfr545
  • chr7:102,493,826-102,494,773
Or55b3 51 Olfr543
  • chr7:102,476,861-102,477,868
Or55b4 51 Olfr544
  • chr7:102,484,117-102,485,118
Species where no ortholog for OR55B1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR55B1P Gene

ENSEMBL:
Gene Tree for OR55B1P (if available)
TreeFam:
Gene Tree for OR55B1P (if available)

Paralogs for OR55B1P Gene

No data available for Paralogs for OR55B1P Gene

Variants for OR55B1P Gene

Additional Variant Information for OR55B1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR55B1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR55B1P Gene

Disorders for OR55B1P Gene

Additional Disease Information for OR55B1P

Genetic Association Database
(GAD)

No disorders were found for OR55B1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR55B1P Gene

Publications for OR55B1P Gene

  1. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58

Products for OR55B1P Gene

Sources for OR55B1P Gene

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