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Aliases for OR52M2P Gene

Aliases for OR52M2P Gene

  • Olfactory Receptor Family 52 Subfamily M Member 2 Pseudogene 2 3 5
  • Olfactory Receptor, Family 52, Subfamily M, Member 2 Pseudogene 2
  • Olfactory Receptor, Family 52, Subfamily M, Member 4 3
  • OR52M4 3

External Ids for OR52M2P Gene

Previous HGNC Symbols for OR52M2P Gene

  • OR52M4

Previous GeneCards Identifiers for OR52M2P Gene

  • GC11U990488
  • GC11M004501

Summaries for OR52M2P Gene

Entrez Gene Summary for OR52M2P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR52M2P Gene

OR52M2P (Olfactory Receptor Family 52 Subfamily M Member 2 Pseudogene) is a Pseudogene.

Additional gene information for OR52M2P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52M2P Gene

Genomics for OR52M2P Gene

GeneHancer (GH) Regulatory Elements for OR52M2P Gene

Promoters and enhancers for OR52M2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J004493 Enhancer 0.9 FANTOM5 ENCODE 0.3 +22.8 22770 0.5 CBFA2T2 CTCF RAD21 IKZF1 IKZF2 ZNF143 REST TRIM22 EED CTBP1 OR52K2 OR52B4 TRIM21 OR51F1 OR52K1 OR52M2P
GH11J004496 Enhancer 0.5 Ensembl ENCODE 0.4 +18.9 18921 1.6 RNF2 OR52K3P OR52K2 TRIM68 OR52K1 OR52M2P
GH11J004539 Enhancer 0.5 Ensembl 0.3 -23.9 -23877 0.4 CTCF RAD21 REST SMC3 ZNF654 OR52K3P OR52K1 OR52K2 C11orf40 OR51D1 OR51E1 TRIM68 OR52M1 OR52M2P
GH11J004532 Enhancer 0.4 Ensembl 0.4 -16.2 -16177 0.2 ZIC2 ZFHX2 OR52K1 OR52K3P OR52K2 C11orf40 TRIM68 OR52M1 OR52M2P
GH11J004495 Enhancer 0.4 Ensembl 0.3 +20.1 20123 0.4 FOSL1 ZBTB21 OR52K2 OR52B4 OR51F1 TRIM68 OR52K1 OR52M2P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR52M2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR52M2P Gene

Genomic Locations for OR52M2P Gene
chr11:4,514,945-4,515,924
(GRCh38/hg38)
Size:
980 bases
Orientation:
Minus strand
chr11:4,536,175-4,537,154
(GRCh37/hg19)
Size:
980 bases
Orientation:
Minus strand

Genomic View for OR52M2P Gene

Genes around OR52M2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR52M2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR52M2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52M2P Gene

Proteins for OR52M2P Gene

Post-translational modifications for OR52M2P Gene

No Post-translational modifications

Other Protein References for OR52M2P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR52M2P Gene

Domains & Families for OR52M2P Gene

Gene Families for OR52M2P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR52M2P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR52M2P Gene

Function for OR52M2P Gene

Phenotypes From GWAS Catalog for OR52M2P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR52M2P Gene

Localization for OR52M2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR52M2P Gene

Pathways & Interactions for OR52M2P Gene

PathCards logo

SuperPathways for OR52M2P Gene

No Data Available

Interacting Proteins for OR52M2P Gene

Gene Ontology (GO) - Biological Process for OR52M2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR52M2P Gene

Drugs & Compounds for OR52M2P Gene

No Compound Related Data Available

Transcripts for OR52M2P Gene

mRNA/cDNA for OR52M2P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR52M2P Gene

No ASD Table

Relevant External Links for OR52M2P Gene

GeneLoc Exon Structure for
OR52M2P
ECgene alternative splicing isoforms for
OR52M2P

Expression for OR52M2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR52M2P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR52M2P Gene:

OR52M2P
genes like me logo Genes that share expression patterns with OR52M2P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR52M2P Gene

Orthologs for OR52M2P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR52M2P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or52m2 51 Olfr553
  • chr7:102,614,010-102,614,987
Species where no ortholog for OR52M2P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR52M2P Gene

ENSEMBL:
Gene Tree for OR52M2P (if available)
TreeFam:
Gene Tree for OR52M2P (if available)

Paralogs for OR52M2P Gene

No data available for Paralogs for OR52M2P Gene

Variants for OR52M2P Gene

Additional Variant Information for OR52M2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR52M2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR52M2P Gene

Disorders for OR52M2P Gene

Additional Disease Information for OR52M2P

Genetic Association Database
(GAD)

No disorders were found for OR52M2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR52M2P Gene

Publications for OR52M2P Gene

  1. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 58

Products for OR52M2P Gene

Sources for OR52M2P Gene

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