Aliases for OR52I1 Gene
Aliases for OR52I1 Gene
External Ids for OR52I1 Gene
- HGNC: 15220
- Entrez Gene: 390037
- Ensembl: ENSG00000232268
- UniProtKB: Q8NGK6
- HORDE: OR52I1
Previous GeneCards Identifiers for OR52I1 Gene
- GC11U990494
- GC11P004580
Summaries for OR52I1 Gene
-
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
GeneCards Summary for OR52I1 Gene
OR52I1 (Olfactory Receptor Family 52 Subfamily I Member 1) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. Gene Ontology (GO) annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR52I2.
UniProtKB/Swiss-Prot for OR52I1 Gene
-
Odorant receptor.
Additional gene information for OR52I1 Gene
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52I1 Gene
Genomics for OR52I1 Gene
GeneHancer (GH) Regulatory Elements for OR52I1 Gene
Promoters and enhancers for OR52I1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J004210 | Enhancer | 0.2 | FANTOM5 | 7.6 | -382.7 | -382664 | 0.3 | GC11M004210 RDXP1 OR52K2 C11orf40 OR52I1 OR51D1 OR52K1 OR52M1 LOC100506082 | ||
| GH11J004492 | Enhancer | 0.2 | FANTOM5 | 4.8 | -101.2 | -101198 | 0.1 | OR52K2 OR51F1 OR52B4 OR51S1 OR51G2 OR51A4 OR52K1 C11orf40 OR52R1 OR51A7 | ||
| GH11J004606 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE | 0.4 | +14.4 | 14385 | 2.3 | PKNOX1 SMAD1 ATF1 SIN3A ZNF2 YY1 POLR2B GLIS2 ZNF207 ZNF143 | TRIM68 RRM1 NUP98 OR52I1 | |
| GH11J004108 | Enhancer | 0.2 | FANTOM5 | 3.2 | -484.8 | -484794 | 0.3 | RRM1-AS1 ART1 ART5 C11orf40 OR52I1 OR52K2 OR52K1 OR52M1 RRM1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around OR52I1 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the OR52I1 gene promoter:
-
- NRSF form 1
- NRSF form 2
Regulatory Element Products
Genomic Locations for OR52I1 Gene
Genomic Locations for OR52I1 Gene
- chr11:4,593,614-4,596,574
- (GRCh38/hg38)
- Size:
- 2,961 bases
- Orientation:
- Plus strand
- chr11:4,615,037-4,616,243
- (GRCh37/hg19)
- Size:
- 1,207 bases
- Orientation:
- Plus strand
Genomic View for OR52I1 Gene
Genes around OR52I1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p15.4 by Entrez Gene
- 11p15.4 by HGNC
- 11p15.4 by Ensembl
OR52I1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for OR52I1 Gene
Proteins for OR52I1 Gene
-
Protein details for OR52I1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8NGK6-O52I1_HUMAN
- Recommended name:
- Olfactory receptor 52I1
- Protein Accession:
- Q8NGK6
- Q6IF91
Protein attributes for OR52I1 Gene
- Size:
- 324 amino acids
- Molecular mass:
- 35386 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAC06007.1; Type=Erroneous initiation; Evidence={ECO:0000305};
Post-translational modifications for OR52I1 Gene
Other Protein References for OR52I1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
- HORDE protein sequence:
Protein Products
-
OriGene Purified Proteins for OR52I1
- Search Origene for MassSpec and Protein Over-expression Lysates for OR52I1
- Origene Custom Protein Services for OR52I1
- Search GeneTex for Proteins for OR52I1
Assay Products
No data available for DME Specific Peptides for OR52I1 Gene
Domains & Families for OR52I1 Gene
Gene Families for OR52I1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- G-protein coupled receptors
- Predicted membrane proteins
Protein Domains for OR52I1 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for OR52I1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q8NGK6- Family:
-
- Belongs to the G-protein coupled receptor 1 family.
Function for OR52I1 Gene
Molecular function for OR52I1 Gene
- UniProtKB/Swiss-Prot Function:
- Odorant receptor.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004930 | G-protein coupled receptor activity | IEA | -- |
| GO:0004984 | olfactory receptor activity | IBA,IEA | -- |
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for OR52I1
-
CRISPR Products
-
OriGene CRISPR knockouts for OR52I1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for OR52I1
- genomics-online: gRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- Applied Biological Materials CRISPR for OR52I1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR52I1
- GenScript: Design CRISPR guide RNA sequences for OR52I1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for OR52I1
- Browse OriGene Inhibitory RNA Products For OR52I1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR52I1
- genomics-online: shRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
Clone Products
- Sino Biological Human cDNA Clone for OR52I1
- VectorBuilder custom plasmid, inducible vectors for OR52I1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR52I1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for OR52I1
- Applied Biological Materials Clones for OR52I1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for OR52I1
No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR52I1 Gene
Localization for OR52I1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for OR52I1 Gene
- Cell membrane; Multi-pass membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 5 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005886 | plasma membrane | TAS,IEA | -- |
| GO:0016020 | membrane | IEA | -- |
| GO:0016021 | integral component of membrane | IEA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR52I1 Gene
Pathways & Interactions for OR52I1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Signaling by GPCR | ||
| 2 | Olfactory Signaling Pathway | ||
Pathways by source for OR52I1 Gene
4 Reactome pathways for OR52I1 Gene
1 KEGG pathway for OR52I1 Gene
Interacting Proteins for OR52I1 Gene
GPS-Prot Interaction Network for OR52I1
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0007165 | signal transduction | IBA,IEA | -- |
| GO:0007186 | G-protein coupled receptor signaling pathway | IEA | -- |
| GO:0007608 | sensory perception of smell | IEA | -- |
| GO:0050896 | response to stimulus | IEA | -- |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | IEA | -- |
No data available for SIGNOR curated interactions for OR52I1 Gene
Transcripts for OR52I1 Gene
mRNA/cDNA for OR52I1 Gene
- (1) REFSEQ mRNAs :
- (0) Additional mRNA sequences :
- -
- (1) Selected AceView cDNA sequences:
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000530443 2961 bps (uc010qyi.2)
- ENST00000450052 1050 bps (uc057yfz.1)
Unigene Clusters for OR52I1 Gene
- Olfactory receptor, family 52, subfamily I, member 1:
- Representative Sequences:
CRISPR Products
-
OriGene CRISPR knockouts for OR52I1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for OR52I1
- genomics-online: gRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- Applied Biological Materials CRISPR for OR52I1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR52I1
- GenScript: Design CRISPR guide RNA sequences for OR52I1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for OR52I1
- Browse OriGene Inhibitory RNA Products For OR52I1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR52I1
- genomics-online: shRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
Clone Products
- Sino Biological Human cDNA Clone for OR52I1
- VectorBuilder custom plasmid, inducible vectors for OR52I1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR52I1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for OR52I1
- Applied Biological Materials Clones for OR52I1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for OR52I1 Gene
mRNA differential expression in normal tissues according to GTEx for OR52I1 Gene
This gene is overexpressed in Brain - Cerebellum (x5.5) and Brain - Cerebellar Hemisphere (x5.2).
NURSA nuclear receptor signaling pathways regulating expression of OR52I1 Gene:
OR52I1SOURCE GeneReport for Unigene cluster for OR52I1 Gene:
Hs.553727Primer Products
-
OriGene qPCR primer pairs for OR52I1
- genomics-online: primer clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR52I1 Gene
Orthologs for OR52I1 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC466339 33 |
|
||
| OR52I1 34 |
|
OneToOne | |||
| mouse (Mus musculus) |
Mammalia | Olfr556 34 |
|
OneToMany | |
| cow (Bos Taurus) |
Mammalia | -- 34 |
|
ManyToMany | |
| -- 34 |
|
ManyToMany | |||
| -- 34 |
|
ManyToMany | |||
| oppossum (Monodelphis domestica) |
Mammalia | -- 34 |
|
ManyToMany | |
| -- 34 |
|
ManyToMany | |||
| -- 34 |
|
ManyToMany | |||
| -- 34 |
|
ManyToMany | |||
| -- 34 |
|
ManyToMany | |||
| chicken (Gallus gallus) |
Aves | -- 34 |
|
OneToMany |
- Species where no ortholog for OR52I1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Evolution for OR52I1 Gene
- ENSEMBL:
- Gene Tree for OR52I1 (if available)
- TreeFam:
- Gene Tree for OR52I1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for OR52I1: view image
Paralogs for OR52I1 Gene
(444) SIMAP similar genes for OR52I1 Gene using alignment to 2 proteins:
- O52I1_HUMAN
- J3KQU7_HUMAN
- OR52I2
- OR52J3
- OR52D1
- OR52M1
- OR52E8
- OR52K3P
- OR52E5
- OR51E2
- OR52Z1
- OR52P1P
- OR52N4
- OR52L2P
- OR52L1
- OR52E4
- OR52E2
- OR52B6
- OR52N2
- OR52R1
- OR52K2
- OR52E1
- OR52B2
- OR52N5
- OR52N1
- OR52H1
- OR52A1
- OR51G1
- OR52A5
- OR52E6
- OR51I2
- OR52K1
- OR52B1P
- OR51E1
- OR52W1
- OR56B1
- OR51F2
- OR51A1P
- OR51V1
- OR51H1P
- OR51G2
- OR51A7
- OR51L1
- OR51I1
- OR52B4
- OR56A1
- OR51T1
- OR51D1
- OR51A4
- OR5D3
- OR56A5
- OR56A4
- OR51F1
- OR51B4
- OR4K5
- OR51M1
- OR56B4
- OR56B2P
- OR51S1
- OR51Q1
- OR51B2
- OR1F12
- OR1C1
- OR51A2
- OR56B3P
- OR56A3
- OR51B5
- OR4K2
- OR2T33
- OR2AT4
- OR2A14
- OR10H4
- OR1N2
- OR7G1
- OR6N1
- OR7G3
- OR6S1
- OR6Q1
- OR2T8
- OR2F1
- OR2D3
- OR1S2
- OR1S1
- OR1E1
- OR1D4
- OR10J4
- OR2AE1
- OR2A2
- OR11A1
- OR10V1
- OR10J5
- OR10H3
- HSA12
- FKSG35
- OR52A4
- OR1D5
- hA2aR
- OR7D4
- OR7C2
- OR5M10
- OR8U1
- OR8I2
- OR7G2
- OR7A2P
- OR6P1
- OR6K3
- OR51B6
- OR4K3
- OR4A5
- OR2T35
- OR2T34
- OR2T12
- OR2AG2
- OR14L1P
- OR11G2
- OR10J1
- OR10H5
- OR4K14
- OR4K1
- OR4C15
- OR2Y1
- OR2W1
- OR2M4
- OR2J2
- OR17-15
- OR13G1
- OR13C8
- OR10H1
- OR10A6
- OR10A3
- OLFR 42A
- OR8G1
- OR7D2
- OR7A5
- OR8U8
- OR2T11
- OR4X1
- OR4L1
- OR2Z1
- OR9I1
- OR8B8
- OR8B3
- OR8B12
- OR7E85P
- OR7C1
- OR7A10
- OR6X1
- OR6T1
- OR5M1
- OR5F1
- OR8U9
- OR8A1
- OR6N2
- OR6M1
- OR5M11
- OR5G3
- OR4K17
- OR4K15
- OR4K13
- OR4D10
- OR4C6
- OR2T5
- OR2T3
- OR2T29
- OR2T2
- OR2T10
- OR2M2
- OR2G6
- OR2B11
- OR2A42
- OR2A12
- OR2A1
- OR1J1
- OR13C3
- OR13A1
- OR10P1
- OR10G3
- OR10A5
- OR4E2
- OR2H1
- OR2D2
- OR1Q1
- OR1N1
- OR1M1
- OR1F1
- OR1E2
- OR17-16
- OR17-137
- OR16-90
- OR16-89
- OR16-36
- OR13C2
- OR10R3P
- OR10J6P
- OR10G4
- 6M1-16
- OR5V1
- OR4A15
- OR2T6
- OR1L1
- OR1D2
- OR11L1
- OR4F6
- OR2J3
- OR2AG1
- OR1L8
- OR10G2
- OR4A47
- OR8G5
- OR8S1
- OR8H3
- OR7E35P
- OR7A17
- OR7-140
- OR7-139
- OR5R1
- OR5B2
- OR9G9
- OR9G1
- OR8J2
- OR8H2
- OR8B2
- OR7E24
- OR6K6
- OR6J1
- OR6F1
- OR5H14
- OR5H1
- OR5AC1
- OR5A2
- OR4X2
- OR4S2
- OR4F4
- OR4F21
- OR4F17
- OR4D6
- OR4D11
- OR4A8P
- OR2V2
- OR2T7
- OR2T27
- OR2T1
- OR2M5
- OR2K2
- OR2J1
- OR2H2
- OR2AK2
- OR2AJ1
- OR2A5
- OR2A25
- OR1L6
- OR1F2P
- OR1E3
- OR1A1
- OR14A2
- OR13C5
- OR11H7
- OR10X1
- OR10J3
- OR10G6
- OR10D4P
- OR10A2
- OR4S1
- OR4F3
- OR4F29
- OR4F16
- OR4F15
- OR4D2
- OR4D1
- OR2T4
- OR2S2
- OR2L8
- OR2L3
- OR2J4P
- OR2C3
- OR1L3
- OR1K1
- OR1J2
- OR16-88
- OR13J1
- OR13F1
- OR13C9
- OR13C4
- OR10W1
- OR10H2
- OR10A7
- OR5AP2
- OR5AR1
- OR5T3
- OR5K4
- OR5H15
- OR1J4
- OR10C1
- OR8G2
- OR9Q2
- OR9A4
- OR8H1
- OR6A2
- OR5E1P
- OR5AS1
- OR9G4
- OR8J1
- OR8D4
- OR8D2
- OR8D1
- OR6K2
- OR6C4
- OR5T1
- OR5M8
- OR5L1
- OR5H6
- OR5B21
- OR5AU1
- OR5AN1
- OR51J1
- OR4F5
- OR4E1
- OR4D9
- OR4C5
- OR4C3
- OR4B1
- OR4A4P
- OR3A1
- OR2V1
- OR2M7
- OR2M3
- OR2C1
- OR2B8P
- OR2A7
- OR1B1
- OR11H6
- OR11H12
- OR10Z1
- OR10R2
- OR10AG1
- OR10A4
- OR4M1
- OR4D5
- OR2L5
- OR2B6
- OR2AP1
- OR2A4
- OR1G1
- OR17-130
- OR16-37
- OR14K1
- OR14J1
- OR13H1
- OR10K1
- OR10G9
- OR10K2
- OR5K3
- OR5B12
- OR6B2
- OR1P1
- OR14I1
- OR11H2
- OR11H1
- OR2F2
- OR12D3
- OR10G7
- PJCG2
- OR9Q1
- OR8K1
- OR6B1
- OR5P2
- OR5L2
- OR5I1
- OR5D18
- OR5D14
- OR6Y1
- OR6C75
- OR6C74
- OR6C70
- OR6C6
- OR6C3
- OR6C1
- OR6B3
- OR5T2
- OR5K2
- OR5K1
- OR5B17
- OR5AC2
- OR4Q3
- OR4Q2
- OR4N5
- OR4N2
- OR4C13
- OR3A4P
- OR3A2
- OR2L2
- OR2L13
- OR1L4
- OR14C36
- OR11H4
- OR10G8
- OR10AD1
- OR10AC1P
- OR4M2
- OR2G3
- OR2B3
- OR2B2
- OR1I1
- OR1E3P
- OR1A2
- OR10T2
- OR10D3
- OR8J3
- OR9K2
- tpcr110
- PJCG1
- OR8K5
- OR6V1
- OR5P3
- OR5M9
- OR5B3
- OR5AK3P
- olfr89
- OR8B4
- OR6C2
- OR5AL1
- OR4P4
- OR4N4
- OR4C45
- OR4A16
- OR3A3
- OR2W6P
- OR2W3
- OR2G2
- OR4C46
- OR4C12
- OR2H5P
- OR13D1
- OR12D2
- OLFR 42B
- JCG4
- HSA10
- OR5C1
- OR5AK2
- OR6C76
- OR6C68
- OR6C65
- OR5M3
- OR5A1
- OR4C16
- OR10Q1
Variants for OR52I1 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000722768 | -- | 4,592,763(+) | T/G | upstream_transcript_variant | |
| rs1001656700 | -- | 4,593,603(+) | A/G | upstream_transcript_variant | |
| rs1001995316 | -- | 4,592,424(+) | T/C | upstream_transcript_variant | |
| rs1005066123 | -- | 4,593,275(+) | C/T | upstream_transcript_variant | |
| rs1005338506 | -- | 4,593,049(+) | T/C | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1586n54 | CNV | loss | 21841781 |
| esv2762892 | CNV | loss | 21179565 |
| nsv1047344 | CNV | loss | 25217958 |
| nsv1054705 | CNV | loss | 25217958 |
| nsv832055 | CNV | loss | 17160897 |
| nsv971982 | CNV | duplication | 23825009 |
Residual Variation Intolerance Score:
96.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
8.09;
84.48% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for OR52I1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- OR52I1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR52I1 Gene
Disorders for OR52I1 Gene
Additional Disease Information for OR52I1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for OR52I1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR52I1 Gene
Publications for OR52I1 Gene
- Genome-wide linkage scans for type 2 diabetes mellitus in four ethnically diverse populations-significant evidence for linkage on chromosome 4q in African Americans: the Family Investigation of Nephropathy and Diabetes Research Group. (PMID: 19795399) Malhotra A … Family Investigation of Nephropathy and Diabetes Research Group (Diabetes/metabolism research and reviews 2009) 3 44 58
- The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 58
- Novel human G-protein-coupled receptors. (PMID: 12732197) Vanti WB … O'Dowd BF (Biochemical and biophysical research communications 2003) 3 58
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
Products for OR52I1 Gene
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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- High-throughput Antibody Production Service
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- VectorBuilder custom plasmid, inducible vectors for OR52I1
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- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
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- Yeast expression
- antibodies-online: Search results for 19 available OR52I1 Antibodies ranked by validation data
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- antibodies-online: Search results for available OR52I1 related products ranked by validation data
- Search GeneTex for Antibodies for OR52I1
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- Horizon Cell Lines for OR52I1
- genomics-online: cdna clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- orf clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- genomics-online: gRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- genomics-online: primer clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- genomics-online: shRNA clones - Search results for 23 available OR52I1 gene related products
- Overview of 23 available OR52I1 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for OR52I1
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- GeneCopoeia miRNA 3'UTR Target clone products for OR52I1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR52I1
Sources for OR52I1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
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- (18) KEGG
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- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
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- (128) ViGene Biosciences
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- (133) ENCODE
- (134) ProSci
- (135) Horizon
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- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt