Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR51F2 Gene

Aliases for OR51F2 Gene

  • Olfactory Receptor Family 51 Subfamily F Member 2 2 3 5
  • Olfactory Receptor OR11-23 3 4
  • Olfactory Receptor 51F2 3 4
  • Olfactory Receptor, Family 51, Subfamily F, Member 2 2
  • OR11-23 3
  • OR51F2 5

External Ids for OR51F2 Gene

Previous GeneCards Identifiers for OR51F2 Gene

  • GC11U990517
  • GC11P004808
  • GC11P004799
  • GC11P004842

Summaries for OR51F2 Gene

Entrez Gene Summary for OR51F2 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR51F2 Gene

OR51F2 (Olfactory Receptor Family 51 Subfamily F Member 2) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory transduction. Gene Ontology (GO) annotations related to this gene include G protein-coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR51C1P.

UniProtKB/Swiss-Prot Summary for OR51F2 Gene

Gene Wiki entry for OR51F2 Gene

No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR51F2 Gene

Genomics for OR51F2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OR51F2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J004626 Enhancer 0.8 Ensembl ENCODE 10.2 -194.9 -194875 0.3 ZNF654 CTCF REST RAD21 SMC3 ZNF316 ZNF2 ARID2 MAFK ZNF143 OR51F2 OR52I2 C11orf40 TRIM68 HSALNG0082351 lnc-OR51D1-1 OR51D1
GH11J004881 Enhancer 0.7 ENCODE 9.8 +60.9 60902 0.8 NCOR1 IKZF1 TAL1 STAT5A TCF12 MTA2 NR2F6 TEAD4 DPF2 ARID1B OR51T1 OR51F2 OR51A6P lnc-OR51G2-1 OR51A7 MMP26
GH11J004647 Enhancer 0.3 Ensembl 10.7 -173.9 -173920 0.4 ATF2 JUN OR51F2 OR51E2 TRIM68 OR51F1 C11orf40 OR51E1 lnc-OR51E1-1
GH11J004480 Enhancer 0.9 FANTOM5 Ensembl ENCODE 3.8 -338.9 -338867 4.9 ZNF316 NFE2 JUND MYNN SPI1 ZFP69B DPF2 ATF3 ZNF692 FOS OR52K1 OR52K3P TRIM68 TRIM21 OR51F2 OR52K2 OR51D1 OR51T1 OR51G1 lnc-OR52K2-1
GH11J004627 Enhancer 0.3 Ensembl 10.2 -193.7 -193720 1.6 CTCF OR51F2 OR52I2 C11orf40 OR51F1 OR52B4 TRIM68 HSALNG0082351 lnc-OR51D1-1 OR51D1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR51F2 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for OR51F2

Top Transcription factor binding sites by QIAGEN in the OR51F2 gene promoter:
  • AML1a
  • COMP1
  • HOXA9
  • HOXA9B
  • Ik-3
  • Meis-1
  • Meis-1a
  • Pbx1a
  • POU3F2 (N-Oct-5a)
  • POU3F2 (N-Oct-5b)

Genomic Locations for OR51F2 Gene

Latest Assembly
chr11:4,821,321-4,822,456
(GRCh38/hg38)
Size:
1,136 bases
Orientation:
Plus strand

Previous Assembly
chr11:4,842,551-4,843,686
(GRCh37/hg19 by Entrez Gene)
Size:
1,136 bases
Orientation:
Plus strand

chr11:4,842,551-4,843,686
(GRCh37/hg19 by Ensembl)
Size:
1,136 bases
Orientation:
Plus strand

Genomic View for OR51F2 Gene

Genes around OR51F2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR51F2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR51F2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR51F2 Gene

Proteins for OR51F2 Gene

  • Protein details for OR51F2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NH61-O51F2_HUMAN
    Recommended name:
    Olfactory receptor 51F2
    Protein Accession:
    Q8NH61
    Secondary Accessions:
    • Q6IFI1

    Protein attributes for OR51F2 Gene

    Size:
    342 amino acids
    Molecular mass:
    38518 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05776.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for OR51F2 Gene

Post-translational modifications for OR51F2 Gene

  • Glycosylation at Asn17
  • Modification sites at PhosphoSitePlus

Other Protein References for OR51F2 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR51F2 Gene

Domains & Families for OR51F2 Gene

Gene Families for OR51F2 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Plasma proteins
  • Predicted membrane proteins

Protein Domains for OR51F2 Gene

InterPro:
Blocks:
  • Olfactory receptor signature

Suggested Antigen Peptide Sequences for OR51F2 Gene

GenScript: Design optimal peptide antigens:
  • Olfactory receptor OR11-23 (O51F2_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q8NH61

UniProtKB/Swiss-Prot:

O51F2_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR51F2: view

Function for OR51F2 Gene

Molecular function for OR51F2 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR51F2 Gene

Gene Ontology (GO) - Molecular Function for OR51F2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA,IBA 21873635
genes like me logo Genes that share ontologies with OR51F2: view
genes like me logo Genes that share phenotypes with OR51F2: view

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR51F2

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR51F2 Gene

Localization for OR51F2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR51F2 Gene

Cell membrane. Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR51F2 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR51F2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA,TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR51F2: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR51F2 Gene

Pathways & Interactions for OR51F2 Gene

genes like me logo Genes that share pathways with OR51F2: view

Pathways by source for OR51F2 Gene

Interacting Proteins for OR51F2 Gene

Gene Ontology (GO) - Biological Process for OR51F2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G protein-coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR51F2: view

No data available for SIGNOR curated interactions for OR51F2 Gene

Drugs & Compounds for OR51F2 Gene

No Compound Related Data Available

Transcripts for OR51F2 Gene

mRNA/cDNA for OR51F2 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR51F2

Alternative Splicing Database (ASD) splice patterns (SP) for OR51F2 Gene

No ASD Table

Relevant External Links for OR51F2 Gene

GeneLoc Exon Structure for
OR51F2

Expression for OR51F2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR51F2 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for OR51F2 Gene



Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OR51F2

SOURCE GeneReport for Unigene cluster for OR51F2 Gene:

Hs.553562
genes like me logo Genes that share expression patterns with OR51F2: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR51F2 Gene

Orthologs for OR51F2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR51F2 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC466352 29
  • 98.93 (n)
OR51F2 30
  • 97 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia OR51F2 29 30
  • 88.82 (n)
OneToOne
Rat
(Rattus norvegicus)
Mammalia Olr51 29
  • 85.82 (n)
Dog
(Canis familiaris)
Mammalia OR51F2 30
  • 85 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Or51f2 45 Olfr568 29 16 30
  • 84.19 (n)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia OR51F2 30
  • 75 (a)
OneToOne
Species where no ortholog for OR51F2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR51F2 Gene

ENSEMBL:
Gene Tree for OR51F2 (if available)
TreeFam:
Gene Tree for OR51F2 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for OR51F2: view image
Alliance of Genome Resources:
Additional Orthologs for OR51F2

Paralogs for OR51F2 Gene

(403) SIMAP similar genes for OR51F2 Gene using alignment to 1 proteins:

  • O51F2_HUMAN
genes like me logo Genes that share paralogs with OR51F2: view

Variants for OR51F2 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for OR51F2 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for OR51F2 Gene

Variant ID Type Subtype PubMed ID
dgv1026n100 CNV loss 25217958
dgv1587n54 CNV loss 21841781
dgv1588n54 CNV loss 21841781
esv2673268 CNV deletion 23128226
esv2760633 CNV loss 21179565
esv3579253 CNV loss 25503493
esv3625193 CNV loss 21293372
esv3625194 CNV loss 21293372
esv3891914 CNV gain 25118596
nsv1054847 CNV gain 25217958
nsv467666 CNV loss 19166990

Variation tolerance for OR51F2 Gene

Residual Variation Intolerance Score: 88.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.72; 66.25% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for OR51F2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR51F2
Leiden Open Variation Database (LOVD)
OR51F2

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for OR51F2 Gene

Disorders for OR51F2 Gene

Additional Disease Information for OR51F2

No disorders were found for OR51F2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR51F2 Gene

Publications for OR51F2 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4
  2. Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei. (PMID: 30021884) Fasci D … Heck AJR (Molecular & cellular proteomics : MCP 2018) 3
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  4. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4

Products for OR51F2 Gene

Sources for OR51F2 Gene