Aliases for OR4N4C Gene

Aliases for OR4N4C Gene

  • Olfactory Receptor Family 4 Subfamily N Member 4C 2 3 5
  • Olfactory Receptor 4N4C 4
  • Olfactory Receptor 4N4 3
  • OR4N4C 5

External Ids for OR4N4C Gene

Summaries for OR4N4C Gene

GeneCards Summary for OR4N4C Gene

OR4N4C (Olfactory Receptor Family 4 Subfamily N Member 4C) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory transduction. An important paralog of this gene is LINC02203.

UniProtKB/Swiss-Prot Summary for OR4N4C Gene

Additional gene information for OR4N4C Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR4N4C Gene

Genomics for OR4N4C Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OR4N4C Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J021638 Enhancer 0.2 Ensembl 250.7 +0.5 522 1 OR4M2B OR4N4C piR-49459-002 ENSG00000281179 LINC02203
GH15J021693 Enhancer 0.7 Ensembl dbSUPER 0.2 +54.2 54222 3.6 TRIM22 BHLHE40 IKZF1 TCF12 ZNF687 IKZF2 ZNF143 CTCF piR-45429-001 OR4N3BP ENSG00000281179 OR4N4C
GH15J021699 Enhancer 0.2 Ensembl 0.2 +67.1 67122 1 ENSG00000281113 ENSG00000281087 HSALNG0104424-001 LOC107987218 ENSG00000281179 OR4N4C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR4N4C on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OR4N4C Gene

Latest Assembly
chr15:21,638,579-21,653,034
(GRCh38/hg38)
Size:
14,456 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr15(PATCHES):2,227,742-2,242,193 (+)

Genomic View for OR4N4C Gene

Genes around OR4N4C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR4N4C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR4N4C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR4N4C Gene

Proteins for OR4N4C Gene

  • Protein details for OR4N4C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A096LPK9-ORN4C_HUMAN
    Recommended name:
    Olfactory receptor 4N4C
    Protein Accession:
    A0A096LPK9

    Protein attributes for OR4N4C Gene

    Size:
    316 amino acids
    Molecular mass:
    35706 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR4N4C Gene

Post-translational modifications for OR4N4C Gene

No Post-translational modifications

Other Protein References for OR4N4C Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for OR4N4C Gene

Domains & Families for OR4N4C Gene

Gene Families for OR4N4C Gene

Protein Domains for OR4N4C Gene

Graphical View of Domain Structure for InterPro Entry

A0A096LPK9

UniProtKB/Swiss-Prot:

ORN4C_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR4N4C: view

No data available for Suggested Antigen Peptide Sequences for OR4N4C Gene

Function for OR4N4C Gene

Molecular function for OR4N4C Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR4N4C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR4N4C: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR4N4C Gene

Localization for OR4N4C Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR4N4C Gene

Membrane. Multi-pass membrane protein.

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for OR4N4C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR4N4C: view

No data available for Subcellular locations from COMPARTMENTS for OR4N4C Gene

Pathways & Interactions for OR4N4C Gene

genes like me logo Genes that share pathways with OR4N4C: view

Pathways by source for OR4N4C Gene

Interacting Proteins for OR4N4C Gene

Gene Ontology (GO) - Biological Process for OR4N4C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G protein-coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR4N4C: view

No data available for SIGNOR curated interactions for OR4N4C Gene

Drugs & Compounds for OR4N4C Gene

No Compound Related Data Available

Transcripts for OR4N4C Gene

mRNA/cDNA for OR4N4C Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR4N4C Gene

No ASD Table

Relevant External Links for OR4N4C Gene

GeneLoc Exon Structure for
OR4N4C

Expression for OR4N4C Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR4N4C Gene

Orthologs for OR4N4C Gene

Evolution for OR4N4C Gene

ENSEMBL:
Gene Tree for OR4N4C (if available)
TreeFam:
Gene Tree for OR4N4C (if available)
Alliance of Genome Resources:
Additional Orthologs for OR4N4C

No data available for Orthologs for OR4N4C Gene

Paralogs for OR4N4C Gene

genes like me logo Genes that share paralogs with OR4N4C: view

Variants for OR4N4C Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for OR4N4C Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for OR4N4C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR4N4C
Leiden Open Variation Database (LOVD)
OR4N4C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR4N4C Gene

Disorders for OR4N4C Gene

No disorders were found for OR4N4C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR4N4C Gene

Publications for OR4N4C Gene

  1. Expert curation of the human and mouse olfactory receptor gene repertoires identifies conserved coding regions split across two exons. (PMID: 32126975) Barnes IHA … Frankish A (BMC genomics 2020) 2 3
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody MC … Nusbaum C (Nature 2006) 4

No data available for Mastermind for OR4N4C Gene

Products for OR4N4C Gene

Sources for OR4N4C Gene