OR2V2 Gene (Protein Coding)

Olfactory Receptor Family 2 Subfamily V Member 2

GC05P181941
GIFtS:
31
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone rec... See more...

Aliases for OR2V2 Gene

Aliases for OR2V2 Gene

  • Olfactory Receptor Family 2 Subfamily V Member 2 2 3 5
  • Olfactory Receptor OR5-3 3 4
  • Olfactory Receptor 2V2 3 4
  • Olfactory Receptor 2V3 3 4
  • OST713 2 3
  • OR2V3 3 4
  • Olfactory Receptor, Family 2, Subfamily V, Member 2 2
  • Olfactory Receptor, Family 2, Subfamily V, Member 3 3
  • OR2V2 5

External Ids for OR2V2 Gene

Previous HGNC Symbols for OR2V2 Gene

  • OR2V3

Previous GeneCards Identifiers for OR2V2 Gene

  • GC13U990069
  • GC05P180691
  • GC05P180514
  • GC05P180581
  • GC05P181154
  • GC05P181185
  • GC05P181204
  • GC05P181491
  • GC05P181629
  • GC05P181778

Summaries for OR2V2 Gene

Entrez Gene Summary for OR2V2 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2V2 Gene

OR2V2 (Olfactory Receptor Family 2 Subfamily V Member 2) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory transduction. Gene Ontology (GO) annotations related to this gene include G protein-coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR2V1.

UniProtKB/Swiss-Prot Summary for OR2V2 Gene

Gene Wiki entry for OR2V2 Gene

Additional gene information for OR2V2 Gene

No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OR2V2 Gene

Genomics for OR2V2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for OR2V2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05J181147 Enhancer 0.5 Ensembl 250.7 -0.6 -585 0.8 TAL1 PRDM10 ZEB2 TCF12 ZNF184 CBFA2T2 CBFA2T3 HSALNG0047224 OR2V2 ENSG00000248514 OR2V1
GH05J181148 Enhancer 0.2 Ensembl 250.7 +0.1 115 0.2 HSALNG0047224 OR2V2 RACK1 HSALNG0047227 TRIM7
GH05J180784 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 11.1 -360.4 -360410 5.2 ZNF654 POLR2A ZIC2 CTCF REST TRIM22 ZNF217 SIN3A RAD21 RFX5 HSALNG0047194 lnc-MGAT1-1 MGAT1 ZFP62 OR2V2 OR2Y1 TRIM7-AS1 TRIM7 RACK1 BTNL3
GH05J180781 Enhancer 0.8 dbSUPER 11.1 -366.0 -366010 0.7 NCOR1 NFIC MNT NBN TAL1 SKIL NCOA2 HLTF STAT5A ZNF318 OR2V2 MGAT1 OR2Y1 CNOT6 HSALNG0047194 piR-61029-127
GH05J181107 Enhancer 0.8 Ensembl 10.9 -39.6 -39632 0.6 NCOR1 IKZF1 NFIC ARNT NBN TAL1 ZFP91 MYNN PRDM10 STAT5A OR2V1 OR2V2 RPL13P10 LOC729707 TRV-CAC1-3 BTNL9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR2V2 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for OR2V2

Top Transcription factor binding sites by QIAGEN in the OR2V2 gene promoter:
  • c-Myc
  • Evi-1
  • GATA-1
  • Max
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Nkx3-1 v3
  • Nkx3-1 v4
  • Pax-6

Genomic Locations for OR2V2 Gene

Latest Assembly
chr5:181,147,586-181,159,285
(GRCh38/hg38)
Size:
11,700 bases
Orientation:
Plus strand

Previous Assembly
chr5:180,574,586-180,586,285
(GRCh37/hg19 by Entrez Gene)
Size:
11,700 bases
Orientation:
Plus strand

chr5:180,581,943-180,582,890
(GRCh37/hg19 by Ensembl)
Size:
948 bases
Orientation:
Plus strand

Genomic View for OR2V2 Gene

Genes around OR2V2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR2V2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR2V2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR2V2 Gene

Proteins for OR2V2 Gene

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  2. Protein products for research
  3. Assay products for research

  • Protein details for OR2V2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96R30-OR2V2_HUMAN
    Recommended name:
    Olfactory receptor 2V2
    Protein Accession:
    Q96R30
    Secondary Accessions:
    • Q6IFL6
    • Q8NGV1

    Protein attributes for OR2V2 Gene

    Size:
    315 amino acids
    Molecular mass:
    35339 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR2V2 Gene

Protein Expression for OR2V2 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for OR2V2 Gene

  • Glycosylation at Asn6
  • Modification sites at PhosphoSitePlus

Other Protein References for OR2V2 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR2V2 Gene

Domains & Families for OR2V2 Gene

Gene Families for OR2V2 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR2V2 Gene

InterPro:
Blocks:
  • Olfactory receptor signature

Suggested Antigen Peptide Sequences for OR2V2 Gene

GenScript: Design optimal peptide antigens:
  • Olfactory receptor OR5-3 (OR2V2_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q96R30

UniProtKB/Swiss-Prot:

OR2V2_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR2V2: view

Function for OR2V2 Gene

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  4. Inhibitory RNAs for research
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  6. Cell Lines for research

Molecular function for OR2V2 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR2V2 Gene

Gene Ontology (GO) - Molecular Function for OR2V2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G protein-coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR2V2: view
genes like me logo Genes that share phenotypes with OR2V2: view

Animal Models for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR2V2

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR2V2 Gene

Localization for OR2V2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR2V2 Gene

Cell membrane. Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR2V2 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR2V2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR2V2: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR2V2 Gene

Pathways & Interactions for OR2V2 Gene

genes like me logo Genes that share pathways with OR2V2: view

Pathways by source for OR2V2 Gene

1 KEGG pathway for OR2V2 Gene

Interacting Proteins for OR2V2 Gene

Selected Interacting proteins: Q96R30-OR2V2_HUMAN for OR2V2 Gene via IID

GPS-Prot Interaction Network for OR2V2

Gene Ontology (GO) - Biological Process for OR2V2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G protein-coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR2V2: view

No data available for SIGNOR curated interactions for OR2V2 Gene

Drugs & Compounds for OR2V2 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for OR2V2 Gene

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mRNA/cDNA for OR2V2 Gene

1 REFSEQ mRNAs :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for OR2V2

Alternative Splicing Database (ASD) splice patterns (SP) for OR2V2 Gene

No ASD Table

Relevant External Links for OR2V2 Gene

GeneLoc Exon Structure for
OR2V2

Expression for OR2V2 Gene

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  1. Primer products for research
  2. Gene Expression Assays for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR2V2 Gene

mRNA expression in normal human tissues for OR2V2 Gene
mRNA expression by BioGPS for OR2V2 GenemRNA expression by GTEx for OR2V2 Gene

Protein differential expression in normal tissues from HIPED for OR2V2 Gene

This gene is overexpressed in Urine (68.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for OR2V2 Gene



Protein tissue co-expression partners for OR2V2 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for OR2V2

SOURCE GeneReport for Unigene cluster for OR2V2 Gene:

Hs.553681
genes like me logo Genes that share expression patterns with OR2V2: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR2V2 Gene

Orthologs for OR2V2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR2V2 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
 Mammalia LOC471781 29
  • 99.37 (n)
OR2V2 30
  • 99 (a)
 OneToOne
Cow
(Bos Taurus)
 Mammalia OR2V2 29
  • 87.2 (n)
-- 30
  • 87 (a)
 OneToMany
-- 30
  • 84 (a)
 OneToMany
Rat
(Rattus norvegicus)
 Mammalia Olr1384 29
  • 85.58 (n)
Mouse
(Mus musculus)
 Mammalia Or2v2 45 Olfr1396 29 16 30
  • 85.03 (n)
 OneToOne
Oppossum
(Monodelphis domestica)
 Mammalia -- 30
  • 74 (a)
 ManyToMany
-- 30
  • 74 (a)
 ManyToMany
Dog
(Canis familiaris)
 Mammalia -- 30
  • 57 (a)
 ManyToMany
Species where no ortholog for OR2V2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for OR2V2 Gene

ENSEMBL:
Gene Tree for OR2V2 (if available)
TreeFam:
Gene Tree for OR2V2 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for OR2V2: view image
Alliance of Genome Resources:
Additional Orthologs for OR2V2

Paralogs for OR2V2 Gene

Paralogs for OR2V2 Gene

(447) SIMAP similar genes for OR2V2 Gene using alignment to 1 proteins:

  • OR2V2_HUMAN

Pseudogenes.org Pseudogenes for OR2V2 Gene

genes like me logo Genes that share paralogs with OR2V2: view

Variants for OR2V2 Gene

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Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for OR2V2 Gene

SNP ID Clinical significance and condition Chr 05 pos Variation AA Info Type
rs17617270 -- p.Ala34Val
rs2546423 -- p.His221Arg

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for OR2V2 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for OR2V2 Gene

Variant ID Type Subtype PubMed ID
dgv10251n54 CNV gain 21841781
dgv5861n100 CNV gain 25217958
dgv5862n100 CNV gain 25217958
dgv5863n100 CNV gain 25217958
dgv735n27 CNV gain 19166990
esv2436663 OTHER inversion 19546169
esv2763893 CNV gain 21179565
esv3607812 CNV gain 21293372
esv3607816 CNV gain 21293372
esv8228 OTHER inversion 19470904
nsv1032581 CNV gain 25217958
nsv428133 CNV gain 18775914
nsv471062 CNV gain 18288195
nsv5163 CNV deletion 18451855
nsv520110 CNV gain 19592680
nsv600729 CNV gain 21841781
nsv600730 CNV loss 21841781
nsv830567 CNV loss 17160897

Variation tolerance for OR2V2 Gene

Residual Variation Intolerance Score: 74.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.10; 69.13% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for OR2V2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR2V2
Leiden Open Variation Database (LOVD)
OR2V2

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR2V2 Gene

Disorders for OR2V2 Gene

Additional Disease Information for OR2V2

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform

No disorders were found for OR2V2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR2V2 Gene

Publications for OR2V2 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4
  2. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 4
  3. Expert curation of the human and mouse olfactory receptor gene repertoires identifies conserved coding regions split across two exons. (PMID: 32126975) Barnes IHA … Frankish A (BMC genomics 2020) 3
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3

ExternalLinks

View latest publications for OR2V2 gene in Mastermind

Products for OR2V2 Gene

Sources for OR2V2 Gene