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OR2I1P Gene(Pseudogene)

Olfactory Receptor Family 2 Subfamily I Member 1 Pseudogene

GCID:
GC06P031134
GIFtS:
19
Genes Participants
UDN Logo

Aliases for OR2I1P Gene

Aliases for OR2I1P Gene

  • Olfactory Receptor Family 2 Subfamily I Member 1 Pseudogene 2 3 5
  • OR2I3P 3 4
  • OR2I4P 3 4
  • OR2I2 3 4
  • Olfactory Receptor, Family 2, Subfamily I, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 2, Subfamily I, Member 3 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 4 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 5 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 7 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 8 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 9 Pseudogene 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 2 3
  • Olfactory Receptor, Family 2, Subfamily I, Member 6 3
  • Olfactory Receptor OR6-34 Pseudogene 3
  • Olfactory Receptor OR6-1 Pseudogene 3
  • Seven Transmembrane Helix Receptor 3
  • Putative Olfactory Receptor 2I2 4
  • Putative Olfactory Receptor 2I3 4
  • Putative Olfactory Receptor 2I4 4
  • HS6M1-14 3
  • OR2I5P 3
  • OR2I7P 3
  • OR2I8P 3
  • OR2I9P 3
  • OR6-34 3
  • OR6-1 3
  • OR2I6 3
  • OR2I1 3

External Ids for OR2I1P Gene

Previous HGNC Symbols for OR2I1P Gene

  • OR2I1
  • OR2I3P
  • OR2I4P
  • OR2I2

Previous GeneCards Identifiers for OR2I1P Gene

  • GC06U990205
  • GC06P029629
  • GC06P029632
  • GC06P029521
  • GC06Pm29435
  • GC06P029522
  • GC06P029603
  • GC06P029782
  • GC06P029992
  • GC06P030166
  • GC06P029719
  • GC06P030053
  • GC06P030293
  • GC06P030447
  • GC06P030624
  • GC06P030817
  • GC06P030968

Summaries for OR2I1P Gene

Entrez Gene Summary for OR2I1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2I1P Gene

OR2I1P (Olfactory Receptor Family 2 Subfamily I Member 1 Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. Gene Ontology (GO) annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity.

UniProtKB/Swiss-Prot for OR2I1P Gene

  • Odorant receptor.

Additional gene information for OR2I1P Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2I1P Gene

Genomics for OR2I1P Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for OR2I1P Gene

Promoters and enhancers for OR2I1P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I029553 Enhancer 1 Ensembl ENCODE 0.8 +3.3 3274 1 ATF1 ZNF121 SCRT2 EGR2 USF2 REST ZEB2 ZFP69B GLIS1 ZBTB26 ZFP57 LINC01015 HCG4P3 HLA-J HLA-K LOC105375009 OR2I1P UBD
GH06I029552 Enhancer 0.9 FANTOM5 ENCODE 0.8 +2.3 2341 0.3 ATF1 FEZF1 ZBTB40 RFX5 ZNF213 RFXANK PRDM10 FOS CREM EZH2 IFITM4P UBD LOC105375009 HLA-F HLA-A OR2I1P
GH06I029559 Enhancer 0.6 ENCODE 0.4 +9.3 9342 0 SOX13 TAF1 SAP130 RAD21 RELA POLR2A HNF4A CREM IKZF2 UBD OR2I1P GABBR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OR2I1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR2I1P Gene

Genomic Locations for OR2I1P Gene
chr6:29,550,407-29,557,721
(GRCh38/hg38)
Size:
7,315 bases
Orientation:
Plus strand
chr6:29,520,882-29,521,943
(GRCh37/hg19)

Genomic View for OR2I1P Gene

Genes around OR2I1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR2I1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR2I1P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR2I1P Gene

Proteins for OR2I1P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for OR2I1P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGU4-OR2I1_HUMAN
    Recommended name:
    Putative olfactory receptor 2I1
    Protein Accession:
    Q8NGU4

    Protein attributes for OR2I1P Gene

    Size:
    316 amino acids
    Molecular mass:
    34115 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR2I1P Gene

Protein Expression for OR2I1P Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for OR2I1P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for OR2I1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR2I1P Gene

Domains & Families for OR2I1P Gene

Gene Families for OR2I1P Gene

HGNC:

Protein Domains for OR2I1P Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for OR2I1P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NGU4

UniProtKB/Swiss-Prot:

OR2I1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR2I1P: view

Function for OR2I1P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for OR2I1P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR2I1P Gene

Gene Ontology (GO) - Molecular Function for OR2I1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
genes like me logo Genes that share ontologies with OR2I1P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR2I1P Gene

Localization for OR2I1P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR2I1P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR2I1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR2I1P: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OR2I1P Gene

Pathways & Interactions for OR2I1P Gene

genes like me logo Genes that share pathways with OR2I1P: view

Pathways by source for OR2I1P Gene

Interacting Proteins for OR2I1P Gene

Gene Ontology (GO) - Biological Process for OR2I1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway TAS --
GO:0007608 sensory perception of smell IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR2I1P: view

No data available for SIGNOR curated interactions for OR2I1P Gene

Drugs & Compounds for OR2I1P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for OR2I1P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for OR2I1P Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR2I1P Gene

No ASD Table

Relevant External Links for OR2I1P Gene

GeneLoc Exon Structure for
OR2I1P
ECgene alternative splicing isoforms for
OR2I1P

Expression for OR2I1P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR2I1P Gene

mRNA expression in normal human tissues for OR2I1P Gene
mRNA expression by BioGPS for OR2I1P GenemRNA expression by GTEx for OR2I1P Gene

mRNA differential expression in normal tissues according to GTEx for OR2I1P Gene

This gene is overexpressed in Liver (x10.9), Small Intestine - Terminal Ileum (x7.5), Pancreas (x6.3), Kidney - Cortex (x5.2), Minor Salivary Gland (x4.2), and Spleen (x4.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for OR2I1P Gene



NURSA nuclear receptor signaling pathways regulating expression of OR2I1P Gene:

OR2I1P
genes like me logo Genes that share expression patterns with OR2I1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR2I1P Gene

Orthologs for OR2I1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR2I1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
 Mammalia Or2bd2 51 Olfr1344
  • chr7:6,439,902-6,440,864
Or2i1 51 Olfr94
  • chr17:37,196,809-37,197,966
Species where no ortholog for OR2I1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR2I1P Gene

ENSEMBL:
Gene Tree for OR2I1P (if available)
TreeFam:
Gene Tree for OR2I1P (if available)

Paralogs for OR2I1P Gene

(402) SIMAP similar genes for OR2I1P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR2I1P: view

No data available for Paralogs for OR2I1P Gene

Variants for OR2I1P Gene

Additional Variant Information for OR2I1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR2I1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR2I1P Gene

Disorders for OR2I1P Gene

No disorders were found for OR2I1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR2I1P Gene

Publications for OR2I1P Gene

  1. Genome-wide association study in Han Chinese identifies three novel loci for human height. (PMID: 23456168) Hao Y … Gu D (Human genetics 2013) 3 58
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 58

Products for OR2I1P Gene

Sources for OR2I1P Gene

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