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Aliases for OR1D3P Gene

Aliases for OR1D3P Gene

  • Olfactory Receptor Family 1 Subfamily D Member 3 Pseudogene 2 3 5
  • Olfactory Receptor, Family 1, Subfamily D, Member 6 Pseudogene 3
  • Olfactory Receptor, Family 1, Subfamily D, Member 7 Pseudogene 3
  • Olfactory Receptor, Family 1, Subfamily D, Member 3 Pseudogene 2
  • OR11-13 3
  • OR11-22 3
  • OR17-23 3
  • OR1D6P 3
  • OR1D7P 3

External Ids for OR1D3P Gene

Previous HGNC Symbols for OR1D3P Gene

  • OR1D6P
  • OR1D7P

Previous GeneCards Identifiers for OR1D3P Gene

  • GC17U990132
  • GC17P003120
  • GC17P003375
  • GC17P003115
  • GC17P003168

Summaries for OR1D3P Gene

Entrez Gene Summary for OR1D3P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR1D3P Gene

OR1D3P (Olfactory Receptor Family 1 Subfamily D Member 3 Pseudogene) is a Pseudogene.

Additional gene information for OR1D3P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR1D3P Gene

Genomics for OR1D3P Gene

GeneHancer (GH) Regulatory Elements for OR1D3P Gene

Promoters and enhancers for OR1D3P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J002389 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 -866.6 -866599 18.6 CEBPB SPI1 NR2F6 SP1 MNT SMARCE1 ZFX HCFC1 MLLT1 GTF2F1 MNT GC17M002387 GC17M002400 GC17M002401 PRPF8 METTL16 SMYD4 HNRNPA1P16 SMG6 RN7SL608P
GH17J003885 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 +624.9 624925 10.9 HDGF ZNF473 SP1 MNT ZFX ZNF133 MLLT1 ZNF687 L3MBTL2 ZSCAN21 CAMKK1 ANKFY1 MYBBP1A ENSG00000235085 PELP1 LOC105371492 P2RX1 OR1E2 OR3A4P OR1E3
GH17J003534 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 14.6 +270.2 270229 2.3 ZBTB33 HDGF ZSCAN21 MTA1 KLF14 ZBTB7A CREM RAD21 IKZF1 GLIS2 TRPV3 GC17M003518 RN7SL608P ZZEF1 ANKFY1 OR1E2 OR3A4P OR1D3P OR1D5 OR1E3
GH17J002847 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -416.8 -416789 1.9 RAD21 PRDM1 ZSCAN21 ELF1 KLF14 MZF1 GLIS2 ZNF600 CTCF RXRA OR1D5 SAMD11P1 OR1D2 EIF4A1P9 OR1E3 OR1D3P OR3A4P OR1E2 ENSG00000262869 PAFAH1B1
GH17J004159 Enhancer 1.4 FANTOM5 Ensembl ENCODE 14.6 +896.5 896501 5.5 ZBTB33 DACH1 SMARCE1 PRDM1 GATA3 MAFK CEBPG ZNF217 IKZF1 ZIC2 ENSG00000263165 PIR41779 ZNF232 CYB5D2 OR1D3P OR1E2 OR3A4P ANKFY1 ENSG00000235085 MYBBP1A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OR1D3P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR1D3P Gene

Genomic Locations for OR1D3P Gene
chr17:3,265,611-3,266,562
(GRCh38/hg38)
Size:
952 bases
Orientation:
Plus strand
chr17:3,168,905-3,169,856
(GRCh37/hg19)
Size:
952 bases
Orientation:
Plus strand

Genomic View for OR1D3P Gene

Genes around OR1D3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR1D3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR1D3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR1D3P Gene

Proteins for OR1D3P Gene

Post-translational modifications for OR1D3P Gene

No Post-translational modifications

Other Protein References for OR1D3P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR1D3P Gene

Domains & Families for OR1D3P Gene

Gene Families for OR1D3P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR1D3P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR1D3P Gene

Function for OR1D3P Gene

Molecular function for OR1D3P Gene

GENATLAS Biochemistry:
olfactory receptor,family 1,subfamily D,member 3,pseudogene,G protein coupled receptor superfamily

Phenotypes From GWAS Catalog for OR1D3P Gene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR1D3P Gene

Localization for OR1D3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR1D3P Gene

Pathways & Interactions for OR1D3P Gene

SuperPathways for OR1D3P Gene

No Data Available

Interacting Proteins for OR1D3P Gene

Gene Ontology (GO) - Biological Process for OR1D3P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR1D3P Gene

Drugs & Compounds for OR1D3P Gene

No Compound Related Data Available

Transcripts for OR1D3P Gene

mRNA/cDNA for OR1D3P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR1D3P Gene

No ASD Table

Relevant External Links for OR1D3P Gene

GeneLoc Exon Structure for
OR1D3P
ECgene alternative splicing isoforms for
OR1D3P

Expression for OR1D3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR1D3P Gene

mRNA differential expression in normal tissues according to GTEx for OR1D3P Gene

This gene is overexpressed in Testis (x11.8), Brain - Nucleus accumbens (basal ganglia) (x8.0), and Brain - Caudate (basal ganglia) (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of OR1D3P Gene:

OR1D3P
genes like me logo Genes that share expression patterns with OR1D3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR1D3P Gene

Orthologs for OR1D3P Gene

Evolution for OR1D3P Gene

ENSEMBL:
Gene Tree for OR1D3P (if available)
TreeFam:
Gene Tree for OR1D3P (if available)

No data available for Orthologs for OR1D3P Gene

Paralogs for OR1D3P Gene

No data available for Paralogs for OR1D3P Gene

Variants for OR1D3P Gene

Additional Variant Information for OR1D3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR1D3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR1D3P Gene

Disorders for OR1D3P Gene

No disorders were found for OR1D3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR1D3P Gene

Publications for OR1D3P Gene

  1. Sequence, structure, and evolution of a complete human olfactory receptor gene cluster. (PMID: 10673334) Glusman G … Lancet D (Genomics 2000) 2 3 58
  2. Olfactory receptor gene cluster on human chromosome 17: possible duplication of an ancestral receptor repertoire. (PMID: 8004088) Ben-Arie N … Lehrach H (Human molecular genetics 1994) 2 3 58
  3. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 58
  4. Organization and evolution of olfactory receptor genes on human chromosome 11. (PMID: 9787077) Buettner JA … Evans GA (Genomics 1998) 3 58

Products for OR1D3P Gene

Sources for OR1D3P Gene

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