Aliases for OR12D2 Gene
Aliases for OR12D2 Gene
External Ids for OR12D2 Gene
- HGNC: 8178
- Entrez Gene: 26529
- Ensembl: ENSG00000280236
- UniProtKB: P58182
- HORDE: OR12D2
Previous GeneCards Identifiers for OR12D2 Gene
- GC06P029421
- GC06P029135
- GC06P029472
- GC06P029364
- GC06P029172
- GC06P029401
- GC06P029403
- GC06P029405
Summaries for OR12D2 Gene
-
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is a segregating pseudogene, where some individuals have an allele that encodes a functional olfactory receptor, while other individuals have an allele encoding a protein that is predicted to be non-functional. [provided by RefSeq, Jun 2015]
GeneCards Summary for OR12D2 Gene
OR12D2 (Olfactory Receptor Family 12 Subfamily D Member 2 (Gene/Pseudogene)) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. Gene Ontology (GO) annotations related to this gene include G-protein coupled receptor activity and transmembrane signaling receptor activity. An important paralog of this gene is OR12D3.
UniProtKB/Swiss-Prot for OR12D2 Gene
-
Odorant receptor.
Additional gene information for OR12D2 Gene
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR12D2 Gene
Genomics for OR12D2 Gene
GeneHancer (GH) Regulatory Elements for OR12D2 Gene
Promoters and enhancers for OR12D2 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06I029467 | Enhancer | 0.2 | FANTOM5 | 2.5 | +72.1 | 72068 | 0.3 | GC06M029436 OR10C1 ZFP57 MAS1L OR11A1 OR14J1 OR2W1 OR2J3 OR2B3 OR12D2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around OR12D2 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the OR12D2 gene promoter:
Regulatory Element Products
Genomic Locations for OR12D2 Gene
Genomic Locations for OR12D2 Gene
- chr6:29,395,631-29,398,008
- (GRCh38/hg38)
- Size:
- 2,378 bases
- Orientation:
- Plus strand
- chr6:29,364,416-29,365,448
- (GRCh37/hg19)
Genomic View for OR12D2 Gene
Genes around OR12D2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p22.1 by Ensembl
- 6p22.1 by Entrez Gene
- 6p22.1 by HGNC
OR12D2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for OR12D2 Gene
Proteins for OR12D2 Gene
-
Protein details for OR12D2 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P58182-O12D2_HUMAN
- Recommended name:
- Olfactory receptor 12D2
- Protein Accession:
- P58182
- B0S862
- Q5SUN9
- Q6IET9
Protein attributes for OR12D2 Gene
- Size:
- 307 amino acids
- Molecular mass:
- 34813 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for OR12D2 Gene
Other Protein References for OR12D2 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
- HORDE protein sequence:
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for OR12D2
- Origene Custom Protein Services for OR12D2
- Novus Biologicals proteins for OR12D2
- antibodies-online: Search results for 3 available OR12D2 Proteins ranked by validation data
- Compare Top OR12D2 Proteins
-
Quality Products:
- Search GeneTex for Proteins for OR12D2
Assay Products
No data available for DME Specific Peptides for OR12D2 Gene
Domains & Families for OR12D2 Gene
Gene Families for OR12D2 Gene
Protein Domains for OR12D2 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for OR12D2 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
P58182- Family:
-
- Belongs to the G-protein coupled receptor 1 family.
Function for OR12D2 Gene
Molecular function for OR12D2 Gene
- GENATLAS Biochemistry:
- olfactory receptor,family 12,subfamily D,member 2,G protein coupled receptor superfamily
- UniProtKB/Swiss-Prot Function:
- Odorant receptor.
Phenotypes From GWAS Catalog for OR12D2 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004888 | transmembrane signaling receptor activity | IBA | -- |
| GO:0004930 | G-protein coupled receptor activity | IEA | -- |
| GO:0004984 | olfactory receptor activity | IEA | -- |
Phenotypes for OR12D2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for OR12D2
-
-
ViGene Biosciences lentiviral particle packaged cDNA for OR12D2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for OR12D2 gene
- Search ViGene Biosciences for OR12D2
CRISPR Products
-
OriGene CRISPR knockouts for OR12D2
- genomics-online: gRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- Applied Biological Materials CRISPR for OR12D2
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR12D2
- GenScript: Design CRISPR guide RNA sequences for OR12D2
miRNA Products
- Search ViGene Biosciences for OR12D2
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for OR12D2
- Browse OriGene Inhibitory RNA Products For OR12D2
- genomics-online: shRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for OR12D2 gene
Clone Products
- VectorBuilder custom plasmid, inducible vectors for OR12D2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR12D2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for OR12D2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for OR12D2
-
ViGene Biosciences adenoviral particle packaged cDNA for OR12D2 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for OR12D2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for OR12D2 gene
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR12D2 Gene
Localization for OR12D2 Gene
Subcellular locations from UniProtKB/Swiss-Prot for OR12D2 Gene
- Cell membrane; Multi-pass membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 5 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005886 | plasma membrane | TAS | -- |
| GO:0016020 | membrane | IEA | -- |
| GO:0016021 | integral component of membrane | IBA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR12D2 Gene
Pathways & Interactions for OR12D2 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Signaling by GPCR | ||
| 2 | Olfactory Signaling Pathway | ||
Pathways by source for OR12D2 Gene
4 Reactome pathways for OR12D2 Gene
1 KEGG pathway for OR12D2 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0007165 | signal transduction | IEA | -- |
| GO:0007186 | G-protein coupled receptor signaling pathway | TAS | -- |
| GO:0007608 | sensory perception of smell | IEA | -- |
| GO:0050896 | response to stimulus | IEA | -- |
| GO:0050907 | detection of chemical stimulus involved in sensory perception | IBA | -- |
No data available for SIGNOR curated interactions for OR12D2 Gene
Transcripts for OR12D2 Gene
mRNA/cDNA for OR12D2 Gene
- (1) REFSEQ mRNAs :
- (4) Additional mRNA sequences :
- (3) Selected AceView cDNA sequences:
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for OR12D2 Gene
CRISPR Products
-
OriGene CRISPR knockouts for OR12D2
- genomics-online: gRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- Applied Biological Materials CRISPR for OR12D2
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR12D2
- GenScript: Design CRISPR guide RNA sequences for OR12D2
miRNA Products
- Search ViGene Biosciences for OR12D2
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for OR12D2
- Browse OriGene Inhibitory RNA Products For OR12D2
- genomics-online: shRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for OR12D2 gene
Clone Products
- VectorBuilder custom plasmid, inducible vectors for OR12D2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR12D2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for OR12D2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for OR12D2 Gene
mRNA differential expression in normal tissues according to GTEx for OR12D2 Gene
This gene is overexpressed in Brain - Hypothalamus (x13.9), Brain - Caudate (basal ganglia) (x10.7), Brain - Hippocampus (x8.2), Brain - Nucleus accumbens (basal ganglia) (x5.0), and Cervix - Endocervix (x4.6).
NURSA nuclear receptor signaling pathways regulating expression of OR12D2 Gene:
OR12D2SOURCE GeneReport for Unigene cluster for OR12D2 Gene:
Hs.247862Evidence on tissue expression from TISSUES for OR12D2 Gene
- Nervous system(4)
Primer Products
-
OriGene qPCR primer pairs for OR12D2
- genomics-online: primer clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR12D2 Gene
Orthologs for OR12D2 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC471939 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Or12d2 51 Olfr102 33 16 |
|
|
|
| Or12d12 51 Olfr101 |
|
|
|||
| Or12d13 51 Olfr103 |
|
|
|||
| Or12d14-ps 51 Olfr104-ps1 |
|
|
|||
| Or12d15 51 Olfr105 |
|
|
|||
| Or12d16-ps 51 Olfr106-ps1 |
|
|
|||
| rat (Rattus norvegicus) |
Mammalia | Olr1736 33 |
|
||
| tropical clawed frog (Silurana tropicalis) |
Amphibia | LOC100497240 33 |
|
- Species where no ortholog for OR12D2 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for OR12D2 Gene
(449) SIMAP similar genes for OR12D2 Gene using alignment to 1 proteins:
- OR12D3
- OR5V1
- OR8U9
- OR8U1
- OR1L4
- OR8U8
- OR1L6
- OR1A1
- OR5M10
- OR5F1
- OR5B3
- OR5AR1
- OR5A1
- OR4E2
- OR4D5
- OR3A3
- OR2B8P
- OR1L3
- OR1E1
- OR1D2
- OR2J3
- OR8D1
- OR7D4
- OR7A5
- OR7A2P
- OR5T1
- OR5M1
- OR5J2
- OR5G3
- OR5B21
- OR5B17
- OR5AP2
- OR5A2
- OR4Q3
- OR4N2
- OR2Y1
- OR2J4P
- OR2C1
- OR2B11
- OR1N1
- OR1L8
- OR1L1
- OR1F2P
- OR1F12
- OR1F1
- OR1C1
- OR10G2
- OR2W3
- OR2J2
- OR2G3
- OR8H2
- OR8H1
- OR8G1
- OR8D4
- OR8D2
- OR7D2
- OR7C1
- OR6Y1
- OR6V1
- OR6N2
- OR6C75
- OR5W2
- OR5T3
- OR5M11
- OR5I1
- OR5B2
- OR5B12
- OR4X2
- OR4S2
- OR4N5
- OR4M1
- OR4K2
- OR4K17
- OR4D2
- OR4C46
- OR2W6P
- OR2W5
- OR2J1
- OR2G6
- OR1K1
- OR1J2
- OR1E2
- OR1A2
- OR16-90
- OR16-89
- OR16-88
- OR16-37
- OR16-36
- OR13G1
- OR13D1
- OR11L1
- OR10R3P
- OR10G9
- OR10A5
- OR10A2
- HSA12
- OR1Q1
- OR1D5
- OR8G2
- OR2W1
- OR9G4
- OR8H3
- OR8B4
- OR8B3
- OR8B2
- OR7G3
- OR7A17
- OR7A10
- OR6X1
- OR6S1
- OR6Q1
- OR6N1
- OR6M1
- OR6B2
- OR6B1
- OR5T2
- OR5R1
- OR5M8
- OR5M3
- OR5K1
- OR5AS1
- OR4S1
- OR4N4
- OR4M2
- OR4K15
- OR4K14
- OR4F6
- OR4F5
- OR4F15
- OR4E1
- OR4D1
- OR4C3
- OR4B1
- OR3A2
- OR3A1
- OR2S2
- OR2K2
- OR2D3
- OR2C3
- OR2AP1
- OR2A25
- OR2A12
- OR1P1
- OR1N2
- OR1M1
- OR1J4
- OR1J1
- OR1D4
- OR13H1
- OR13C9
- OR13C4
- OR13C3
- OR13C2
- OR10Z1
- OR10W1
- OR10Q1
- OR10G8
- OR10G7
- OR10G4
- OR10AG1
- OR6C74
- OR8S1
- OR4F3
- OR4F29
- OR4F16
- OR2B6
- OR2B2
- OR9Q2
- OR9Q1
- OR9K2
- OR9I1
- OR8J2
- OR8I2
- OR8G5
- OR8B8
- OR8B12
- OR8A1
- OR7G2
- OR7C2
- OR6F1
- OR6C70
- OR6C6
- OR6C1
- OR6B3
- OR5M9
- OR5L2
- OR5H6
- OR5H2
- OR5D18
- OR5AU1
- OR5AN1
- OR5AK2
- OR5AC2
- OR4Q2
- OR4K5
- OR4K3
- OR4F4
- OR4F21
- OR4F17
- OR4C15
- OR2H2
- OR2F2
- OR2F1
- OR2AE1
- OR2A5
- OR2A2
- OR2A14
- OR1S2
- OR1I1
- OR1G1
- OR17-16
- OR17-137
- OR13F1
- OR13C8
- OR11H4
- OR11G2
- OR10T2
- OR10K1
- OR10J4
- OR10J1
- OR10G6
- OR10AD1
- OR10A4
- OLFR 42A
- OR10C1
- OR2A1
- OR2H1
- OR2B3
- OR8K3
- OR7E24
- OR6T1
- OR6P1
- OR6K3
- OR6C68
- OR6C3
- OR5P2
- OR5L1
- OR5K3
- OR5K2
- OR5E1P
- OR5D16
- OR5AL1
- OR5AK3P
- OR4X1
- OR4P4
- OR4K1
- OR4D6
- OR4C5
- OR4C45
- OR4C13
- OR4C12
- OR4A8P
- OR4A5
- OR4A15
- OR2T1
- OR2M4
- OR2G2
- OR2D2
- OR2AK2
- OR2A42
- OR1S1
- OR13C5
- OR13A1
- OR11H7
- OR10X1
- OR10S1
- OR10R2
- OR10H2
- OR10G3
- OR10D3
- OR10A3
- HSA10
- 6M1-16
- OR10J5
- OR5H14
- OR14I1
- OR10K2
- OR9A4
- OR14J1
- OR8K5
- OR8K1
- OR8J1
- OR7G1
- OR7-139
- OR6K6
- OR6J1
- OR6C76
- OR6C65
- OR6C4
- OR6C2
- OR6A2
- OR5K4
- OR5H15
- OR5H1
- OR5D13
- OR5AC1
- OR4L1
- OR4K13
- OR4D11
- OR4D10
- OR4C6
- OR4C11
- OR4A47
- OR3A4P
- OR2V2
- OR2T33
- OR2T27
- OR2M2
- OR2L13
- OR2H5P
- OR2AT4
- OR2A7
- OR1E3P
- OR1E3
- OR13J1
- OR11H6
- OR11H2
- OR10P1
- OR10J3
- OR10H1
- OR10D4P
- OR10A7
- OR10A6
- OLFR 42B
- OR11A1
- OR2AG2
- OR2A4
- OR9G9
- OR9G1
- OR8J3
- OR7E5P
- OR7-140
- OR6K2
- OR5P3
- OR5D14
- OR4A4P
- OR4A16
- OR2V1
- OR2T8
- OR2T35
- OR2T3
- OR2T2
- OR2T12
- OR2T10
- OR2M3
- OR2L8
- OR2L5
- OR2L3
- OR2L2
- OR2I1P
- OR2AJ1
- OR1B1
- OR17-15
- OR17-130
- OR14A2
- OR14A16
- OR11H13P
- OR11H12
- OR11H1
- OR10V1
- OR10H5
- OR10H4
- OR10H3
- JCG4
- olfr89
- OR7E35P
- OR5C1
- OR4D9
- OR2Z1
- OR2T7
- OR2T6
- OR2T4
- OR2T34
- OR2T11
- OR2M7
- OR2M5
- OR2AG1
- OR9A1P
- OR7E85P
- OR52L1
- OR2T5
- OR2T29
- OR14K1
- OR9A2
- OR52K1
- OR52E8
- OR52E2
- OR51G2
- OR51E2
- OR51E1
- OR4C16
- OR14L1P
- OR14C36
- OR10J6P
- OR10AC1P
- OR5D3
- OR56B2P
- OR56B1
- OR56A5
- OR56A4
- OR56A1
- OR52L2P
- OR52K2
- OR52E6
- OR51L1
- PJCG1
- OR56A3
- OR52Z1
- OR52N1
- OR52J3
- OR52E4
- OR52E1
- OR52B6
- OR51I2
- OR51F2
- OR51D1
- OR51V1
- OR56B4
- OR52R1
- OR52P1P
- OR52N5
- OR52N4
- OR52M1
- OR52E5
- OR52D1
- OR51I1
- OR51H1P
- OR51G1
- OR51A4
- OR51A2
- OR52N2
- OR52B2
- OR52A5
- OR51T1
- OR51Q1
- OR51B6
- OR51A7
- OR51M1
- OR52I2
- OR52H1
- OR52B1P
- OR52A1
- OR51S1
- OR51B2
- OR52I1
- OR51B5
- OR51B4
- OR52B4
- OR51F1
Variants for OR12D2 Gene
| SNP ID | Clin | Chr 06 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs886043176 | uncertain-significance, not specified | 29,397,421(+) | CC/C | coding_sequence_variant, frameshift | |
| rs1001919409 | -- | 29,395,033(+) | C/T | upstream_transcript_variant | |
| rs1004463002 | -- | 29,396,710(+) | C/T | coding_sequence_variant, missense_variant | |
| rs1004811185 | -- | 29,394,769(+) | A/G | upstream_transcript_variant | |
| rs1008325996 | -- | 29,395,583(+) | C/T | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv10340n54 | CNV | loss | 21841781 |
| esv2639371 | CNV | deletion | 19546169 |
| esv2667426 | CNV | deletion | 23128226 |
| esv2731760 | CNV | deletion | 23290073 |
| esv2731763 | CNV | deletion | 23290073 |
| nsv1074389 | CNV | deletion | 25765185 |
| nsv1122126 | CNV | deletion | 24896259 |
| nsv1145096 | CNV | deletion | 24896259 |
| nsv830624 | CNV | loss | 17160897 |
Residual Variation Intolerance Score:
95.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
15.44;
97.14% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for OR12D2 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR12D2 Gene
Disorders for OR12D2 Gene
Additional Disease Information for OR12D2
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for OR12D2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR12D2 Gene
Publications for OR12D2 Gene
- Sequence variations at the human leukocyte antigen-linked olfactory receptor cluster do not influence female preferences for male odors. (PMID: 19833159) Thompson EE … Ober C (Human immunology 2010) 3 44 58
- High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos LF … Criswell LA (PLoS genetics 2009) 3 44 58
- The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 58
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
- The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 3 4 58
Products for OR12D2 Gene
- Browse R&D Systems for Antibodies
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- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for OR12D2
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- OriGene qPCR primer pairs for OR12D2
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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- GenScript: Next-day shipping of latest version cDNA ORF clones for OR12D2 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for OR12D2
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- GenScript: Design CRISPR guide RNA sequences for OR12D2
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals proteins for OR12D2
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for OR12D2
- VectorBuilder custom plasmid, inducible vectors for OR12D2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR12D2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available OR12D2 related products ranked by validation data
- antibodies-online: Search results for 10 available OR12D2 Elisa Kits ranked by validation data
- Compare Top OR12D2 Elisa Kits
- antibodies-online: Search results for 3 available OR12D2 Proteins ranked by validation data
- Compare Top OR12D2 Proteins
- Quality Products:
- Search GeneTex for Antibodies for OR12D2
- Search GeneTex for Proteins for OR12D2
- ViGene Biosciences adenoviral particle packaged cDNA for OR12D2 gene
- ViGene Biosciences lentiviral particle packaged cDNA for OR12D2 gene
- ViGene Biosciences ready-to-package AAV shRNAs for OR12D2 gene
- Search ViGene Biosciences for OR12D2
- Horizon Cell Lines for OR12D2
- genomics-online: cdna clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- orf clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- genomics-online: gRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- genomics-online: primer clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
- genomics-online: shRNA clones - Search results for 35 available OR12D2 gene related products
- Overview of 35 available OR12D2 gene related products
Sources for OR12D2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems