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Aliases for OPCML-IT2 Gene

Subcategory (RNA class) for OPCML-IT2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OPCML-IT2 Gene

  • OPCML Intronic Transcript 2 2 3 5
  • OPCML Intronic Transcript 2 (Non-Protein Coding) 2

External Ids for OPCML-IT2 Gene

Previous GeneCards Identifiers for OPCML-IT2 Gene

  • GC00U933473
  • GC11M132730

Summaries for OPCML-IT2 Gene

GeneCards Summary for OPCML-IT2 Gene

OPCML-IT2 (OPCML Intronic Transcript 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OPCML-IT2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OPCML-IT2 Gene

Genomics for OPCML-IT2 Gene

GeneHancer (GH) Regulatory Elements for OPCML-IT2 Gene

Promoters and enhancers for OPCML-IT2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I132894 Enhancer 0.5 FANTOM5 0.3 -34.5 -34482 0.4 RXRA HNF4G HNF4A RAD21 OPCML GC11P132899 OPCML-IT2
GH11I132874 Enhancer 0.3 ENCODE 0.4 -14.8 -14804 0.2 FOS OPCML-IT2 GC11P132899 OPCML
GH11I132866 Enhancer 0.2 ENCODE 0.4 -6.9 -6904 0.2 OPCML-IT2 GC11P132899 OPCML
GH11I132875 Enhancer 0.2 FANTOM5 0.4 -15.3 -15253 0.2 OPCML OPCML-IT2 GC11P132899
GH11I132886 Enhancer 0.2 ENCODE 0.3 -26.7 -26683 1.3 GC11P132899 OPCML-IT2 OPCML
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OPCML-IT2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OPCML-IT2 Gene

Genomic Locations for OPCML-IT2 Gene
chr11:132,859,245-132,860,077
(GRCh38/hg38)
Size:
833 bases
Orientation:
Minus strand
chr11:132,729,140-132,729,972
(GRCh37/hg19)

Genomic View for OPCML-IT2 Gene

Genes around OPCML-IT2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OPCML-IT2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OPCML-IT2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for OPCML-IT2 Gene

Proteins for OPCML-IT2 Gene

Post-translational modifications for OPCML-IT2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OPCML-IT2 Gene

Domains & Families for OPCML-IT2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OPCML-IT2 Gene

Function for OPCML-IT2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OPCML-IT2 Gene

Localization for OPCML-IT2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OPCML-IT2 Gene

Pathways & Interactions for OPCML-IT2 Gene

SuperPathways for OPCML-IT2 Gene

No Data Available

Interacting Proteins for OPCML-IT2 Gene

Gene Ontology (GO) - Biological Process for OPCML-IT2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OPCML-IT2 Gene

Drugs & Compounds for OPCML-IT2 Gene

No Compound Related Data Available

Transcripts for OPCML-IT2 Gene

mRNA/cDNA for OPCML-IT2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OPCML-IT2 Gene

No ASD Table

Relevant External Links for OPCML-IT2 Gene

GeneLoc Exon Structure for
OPCML-IT2
ECgene alternative splicing isoforms for
OPCML-IT2

Expression for OPCML-IT2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OPCML-IT2 Gene

genes like me logo Genes that share expression patterns with OPCML-IT2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OPCML-IT2 Gene

Orthologs for OPCML-IT2 Gene

Evolution for OPCML-IT2 Gene

ENSEMBL:
Gene Tree for OPCML-IT2 (if available)
TreeFam:
Gene Tree for OPCML-IT2 (if available)

No data available for Orthologs for OPCML-IT2 Gene

Paralogs for OPCML-IT2 Gene

No data available for Paralogs for OPCML-IT2 Gene

Variants for OPCML-IT2 Gene

Additional Variant Information for OPCML-IT2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OPCML-IT2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OPCML-IT2 Gene

Disorders for OPCML-IT2 Gene

No disorders were found for OPCML-IT2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OPCML-IT2 Gene

Publications for OPCML-IT2 Gene

No publications were found for OPCML-IT2 Gene.

Products for OPCML-IT2 Gene

Sources for OPCML-IT2 Gene

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