Aliases for OOSP4B Gene

Aliases for OOSP4B Gene

  • Oocyte Secreted Protein Family Member 4B 2 3 5
  • Oocyte-Secreted Protein 4B 3 4

External Ids for OOSP4B Gene

Summaries for OOSP4B Gene

GeneCards Summary for OOSP4B Gene

OOSP4B (Oocyte Secreted Protein Family Member 4B) is a Protein Coding gene.

Additional gene information for OOSP4B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OOSP4B Gene

Genomics for OOSP4B Gene

GeneHancer (GH) Regulatory Elements for OOSP4B Gene

Promoters and enhancers for OOSP4B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J059979 Enhancer 0.2 Ensembl 750.6 +1.9 1881 0.2 OOSP4B MS4A3 TCN1 MS4A2 piR-53029-013 NONHSAG008419.2 OOSP1
GH11J059968 Enhancer 0.9 FANTOM5 0.4 -9.7 -9749 0.3 SMARCE1 CC2D1A TEAD4 MLLT1 CBFA2T2 SMARCA4 TRIM24 GMEB1 IKZF1 DPF2 OOSP2 MS4A3 MS4A2 MRPL16 OOSP4A OOSP4B NONHSAG008419.2 OOSP1 ENSG00000214788
GH11J059963 Enhancer 0.3 Ensembl 0.4 -13.6 -13619 0.8 NFE2L2 NFE2 OOSP4A OOSP4B ENSG00000214788 NONHSAG008419.2 OOSP1
GH11J059972 Enhancer 0.2 Ensembl 0.6 -4.9 -4919 0.6 OOSP2 OOSP4B OOSP4A NONHSAG008419.2 OOSP1
GH11J060017 Enhancer 0.3 Ensembl 0.3 +40.1 40081 1 REST piR-36573-014 piR-31470-090 OOSP2 TCN1 MS4A2 piR-53029-013 OOSP4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OOSP4B on UCSC Golden Path with GeneCards custom track

Genomic Locations for OOSP4B Gene

Genomic Locations for OOSP4B Gene
chr11:59,978,020-60,031,077
(GRCh38/hg38)
Size:
53,058 bases
Orientation:
Plus strand
chr11:59,792,381-59,798,550
(GRCh37/hg19)
Size:
6,170 bases
Orientation:
Plus strand

Genomic View for OOSP4B Gene

Genes around OOSP4B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OOSP4B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OOSP4B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OOSP4B Gene

Proteins for OOSP4B Gene

  • Protein details for OOSP4B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A2R8Y4Y8-OSP4B_HUMAN
    Recommended name:
    Oocyte-secreted protein 4B
    Protein Accession:
    A0A2R8Y4Y8

    Protein attributes for OOSP4B Gene

    Size:
    160 amino acids
    Molecular mass:
    18448 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OOSP4B Gene

Post-translational modifications for OOSP4B Gene

No Post-translational modifications

Other Protein References for OOSP4B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for OOSP4B Gene

Domains & Families for OOSP4B Gene

Gene Families for OOSP4B Gene

HGNC:

Protein Domains for OOSP4B Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A0A2R8Y4Y8

UniProtKB/Swiss-Prot:

OSP4B_HUMAN :
  • Belongs to the PLAC1 family.
Family:
  • Belongs to the PLAC1 family.
genes like me logo Genes that share domains with OOSP4B: view

No data available for Suggested Antigen Peptide Sequences for OOSP4B Gene

Function for OOSP4B Gene

Phenotypes From GWAS Catalog for OOSP4B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OOSP4B Gene

Localization for OOSP4B Gene

Subcellular locations from UniProtKB/Swiss-Prot for OOSP4B Gene

Gene Ontology (GO) - Cellular Components for OOSP4B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with OOSP4B: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OOSP4B Gene

Pathways & Interactions for OOSP4B Gene

PathCards logo

SuperPathways for OOSP4B Gene

No Data Available

Interacting Proteins for OOSP4B Gene

Gene Ontology (GO) - Biological Process for OOSP4B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OOSP4B Gene

Drugs & Compounds for OOSP4B Gene

No Compound Related Data Available

Transcripts for OOSP4B Gene

mRNA/cDNA for OOSP4B Gene

(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OOSP4B Gene

No ASD Table

Relevant External Links for OOSP4B Gene

GeneLoc Exon Structure for
OOSP4B
ECgene alternative splicing isoforms for
OOSP4B

Expression for OOSP4B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OOSP4B Gene

Orthologs for OOSP4B Gene

Evolution for OOSP4B Gene

ENSEMBL:
Gene Tree for OOSP4B (if available)
TreeFam:
Gene Tree for OOSP4B (if available)

No data available for Orthologs for OOSP4B Gene

Paralogs for OOSP4B Gene

No data available for Paralogs for OOSP4B Gene

Variants for OOSP4B Gene

Sequence variations from dbSNP and Humsavar for OOSP4B Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1001244992 -- 60,028,212(+) C/T intron_variant
rs1002275458 -- 60,027,425(+) G/A intron_variant
rs1002757088 -- 60,027,804(+) G/A intron_variant
rs1003104283 -- 60,022,853(+) G/A upstream_transcript_variant
rs1003200822 -- 60,024,352(+) C/T intron_variant

Additional Variant Information for OOSP4B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OOSP4B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OOSP4B Gene

Disorders for OOSP4B Gene

No disorders were found for OOSP4B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OOSP4B Gene

Publications for OOSP4B Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4 56

No data available for External Links for OOSP4B Gene

Products for OOSP4B Gene

Sources for OOSP4B Gene