Aliases for OOSP1 Gene

Aliases for OOSP1 Gene

  • Oocyte Secreted Protein 1 2 3 5
  • Oocyte Secreted Protein 1 (Pseudogene) 2 3
  • Putative Oocyte-Secreted Protein 1 Homolog 4

External Ids for OOSP1 Gene

Previous GeneCards Identifiers for OOSP1 Gene

  • GC11U901218
  • GC11P059705

Summaries for OOSP1 Gene

GeneCards Summary for OOSP1 Gene

OOSP1 (Oocyte Secreted Protein 1) is a Pseudogene. An important paralog of this gene is PLAC1.

UniProtKB/Swiss-Prot Summary for OOSP1 Gene

Additional gene information for OOSP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OOSP1 Gene

Genomics for OOSP1 Gene

GeneHancer (GH) Regulatory Elements for OOSP1 Gene

Promoters and enhancers for OOSP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J059959 Enhancer 1.1 Ensembl ENCODE 0.3 +22.8 22780 2.7 SMARCE1 RUNX1 CC2D1A ELF1 HLF L3MBTL2 TEAD4 ZNF652 ZNF148 GTF2F1 TMEM132A TMEM109 FAM111A PATL1 FAM111B STX3 MS4A4E ENSG00000256196 OOSP4A NONHSAG008419.2
GH11J059968 Enhancer 0.9 FANTOM5 0.3 +29.8 29839 0.3 SMARCE1 CC2D1A TEAD4 MLLT1 CBFA2T2 SMARCA4 TRIM24 GMEB1 IKZF1 DPF2 OOSP2 MS4A3 MS4A2 MRPL16 OOSP4A OOSP4B NONHSAG008419.2 OOSP1 ENSG00000214788
GH11J059944 Enhancer 0.3 Ensembl 0.4 +6.5 6469 0.2 POLR2A TCN1 ENSG00000214788 NONHSAG008419.2 OOSP1 OOSP4A
GH11J059963 Enhancer 0.3 Ensembl 0.3 +26.0 25969 0.8 NFE2L2 NFE2 OOSP4A OOSP4B ENSG00000214788 NONHSAG008419.2 OOSP1
GH11J059946 Enhancer 0.2 Ensembl 0.4 +7.7 7669 0.2 OOSP2 MS4A2 TCN1 ENSG00000214788 NONHSAG008419.2 OOSP1 OOSP4A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OOSP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OOSP1 Gene

Genomic Locations for OOSP1 Gene
chr11:59,938,432-59,995,845
(GRCh38/hg38)
Size:
57,414 bases
Orientation:
Plus strand
chr11:59,705,928-59,712,807
(GRCh37/hg19)
Size:
6,880 bases
Orientation:
Plus strand

Genomic View for OOSP1 Gene

Genes around OOSP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OOSP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OOSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OOSP1 Gene

Proteins for OOSP1 Gene

  • Protein details for OOSP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MZH6-OOSP1_HUMAN
    Recommended name:
    Putative oocyte-secreted protein 1 homolog
    Protein Accession:
    A8MZH6

    Protein attributes for OOSP1 Gene

    Size:
    123 amino acids
    Molecular mass:
    14433 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OOSP1 Gene

Post-translational modifications for OOSP1 Gene

No Post-translational modifications

Other Protein References for OOSP1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for OOSP1 Gene

Domains & Families for OOSP1 Gene

Gene Families for OOSP1 Gene

HGNC:

Protein Domains for OOSP1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for OOSP1 Gene

GenScript: Design optimal peptide antigens:
  • Oocyte-secreted protein 1 homolog (OOSP1_HUMAN)

Graphical View of Domain Structure for InterPro Entry

A8MZH6

UniProtKB/Swiss-Prot:

OOSP1_HUMAN :
  • Belongs to the PLAC1 family.
Family:
  • Belongs to the PLAC1 family.
genes like me logo Genes that share domains with OOSP1: view

Function for OOSP1 Gene

Molecular function for OOSP1 Gene

UniProtKB/Swiss-Prot Function:
May be involved in cell differentiation.

Phenotypes From GWAS Catalog for OOSP1 Gene

Phenotypes for OOSP1 Gene

genes like me logo Genes that share phenotypes with OOSP1: view

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OOSP1 Gene

Localization for OOSP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OOSP1 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for OOSP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with OOSP1: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OOSP1 Gene

Pathways & Interactions for OOSP1 Gene

PathCards logo

SuperPathways for OOSP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for OOSP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OOSP1 Gene

Drugs & Compounds for OOSP1 Gene

No Compound Related Data Available

Transcripts for OOSP1 Gene

mRNA/cDNA for OOSP1 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OOSP1 Gene

No ASD Table

Relevant External Links for OOSP1 Gene

GeneLoc Exon Structure for
OOSP1
ECgene alternative splicing isoforms for
OOSP1

Expression for OOSP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OOSP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of OOSP1 Gene:

OOSP1

SOURCE GeneReport for Unigene cluster for OOSP1 Gene:

Hs.722773
genes like me logo Genes that share expression patterns with OOSP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OOSP1 Gene

Orthologs for OOSP1 Gene

Evolution for OOSP1 Gene

ENSEMBL:
Gene Tree for OOSP1 (if available)
TreeFam:
Gene Tree for OOSP1 (if available)

No data available for Orthologs for OOSP1 Gene

Paralogs for OOSP1 Gene

Paralogs for OOSP1 Gene

genes like me logo Genes that share paralogs with OOSP1: view

Variants for OOSP1 Gene

Sequence variations from dbSNP and Humsavar for OOSP1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000015532 -- 59,949,007(+) G/A intron_variant
rs1000034477 -- 59,993,246(+) C/A/T intron_variant
rs1000090076 -- 59,986,581(+) A/G intron_variant
rs1000124571 -- 59,968,912(+) T/G intron_variant
rs1000134920 -- 59,942,927(+) G/A non_coding_transcript_variant

Variation tolerance for OOSP1 Gene

Gene Damage Index Score: 0.54; 11.62% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for OOSP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OOSP1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for OOSP1 Gene

Disorders for OOSP1 Gene

Additional Disease Information for OOSP1

No disorders were found for OOSP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OOSP1 Gene

Publications for OOSP1 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 3 4 56
  2. Oosp1 encodes a novel mouse oocyte-secreted protein. (PMID: 11747200) Yan C … Matzuk MM (Genesis (New York, N.Y. : 2000) 2001) 2 3 56

Products for OOSP1 Gene

Sources for OOSP1 Gene