Aliases for OOEPP2 Gene

Aliases for OOEPP2 Gene

  • OOEP Pseudogene 2 2 3 5
  • OOEPP2 5

External Ids for OOEPP2 Gene

Summaries for OOEPP2 Gene

GeneCards Summary for OOEPP2 Gene

OOEPP2 (OOEP Pseudogene 2) is a Pseudogene.

Additional gene information for OOEPP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for OOEPP2 Gene

Genomics for OOEPP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for OOEPP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J064257 Enhancer 0.7 Ensembl ENCODE 0.4 -10.1 -10082 0.7 ZNF654 REST TRIM22 CTCF RAD21 CUX1 SMC3 ZNF362 ARID3A ZNF660 KICS2 ENSG00000243024 RNU6-1009P ENSG00000255629 OOEPP2 RF00020-009 RNU5A-7P lnc-XPOT-4 C12orf56
GH12J064252 Enhancer 0.6 Ensembl ENCODE 0.4 -13.5 -13511 1.8 CEBPB ZNF133 ZSCAN4 CEBPG KICS2 ENSG00000243024 RNU6-1009P XPOT ENSG00000255629 C12orf56 OOEPP2 RF00020-009 RNU5A-7P lnc-XPOT-4
GH12J064236 Enhancer 0.6 Ensembl 0.3 -29.5 -29511 1.4 CEBPA CTCF FOXA2 RAD21 SMC3 FOXP1 SOX5 FOXA1 TFAP4 SOX13 ENSG00000255629 RF00020-009 RNU5A-7P ENSG00000243024 KICS2 lnc-XPOT-4 OOEPP2 C12orf56
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OOEPP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for OOEPP2 Gene

Latest Assembly
chr12:64,266,411-64,266,771
(GRCh38/hg38)
Size:
361 bases
Orientation:
Plus strand

Previous Assembly
chr12:64,660,191-64,660,551
(GRCh37/hg19 by Entrez Gene)
Size:
361 bases
Orientation:
Plus strand

chr12:64,660,193-64,660,546
(GRCh37/hg19 by Ensembl)
Size:
354 bases
Orientation:
Plus strand

Genomic View for OOEPP2 Gene

Genes around OOEPP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OOEPP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OOEPP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OOEPP2 Gene

Proteins for OOEPP2 Gene

Post-translational modifications for OOEPP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OOEPP2 Gene

Domains & Families for OOEPP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for OOEPP2 Gene

Function for OOEPP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OOEPP2 Gene

Localization for OOEPP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OOEPP2 Gene

Pathways & Interactions for OOEPP2 Gene

PathCards logo

SuperPathways for OOEPP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for OOEPP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for OOEPP2 Gene

Drugs & Compounds for OOEPP2 Gene

No Compound Related Data Available

Transcripts for OOEPP2 Gene

mRNA/cDNA for OOEPP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OOEPP2 Gene

No ASD Table

Relevant External Links for OOEPP2 Gene

GeneLoc Exon Structure for
OOEPP2

Expression for OOEPP2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OOEPP2 Gene

Orthologs for OOEPP2 Gene

Evolution for OOEPP2 Gene

ENSEMBL:
Gene Tree for OOEPP2 (if available)
TreeFam:
Gene Tree for OOEPP2 (if available)
Alliance of Genome Resources:
Additional Orthologs for OOEPP2

No data available for Orthologs for OOEPP2 Gene

Paralogs for OOEPP2 Gene

No data available for Paralogs for OOEPP2 Gene

Variants for OOEPP2 Gene

Additional Variant Information for OOEPP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OOEPP2
Leiden Open Variation Database (LOVD)
OOEPP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OOEPP2 Gene

Disorders for OOEPP2 Gene

No disorders were found for OOEPP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OOEPP2 Gene

Publications for OOEPP2 Gene

No publications were found for OOEPP2 Gene.

No data available for Mastermind for OOEPP2 Gene

Products for OOEPP2 Gene

Sources for OOEPP2 Gene