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Aliases for ODF2-AS1 Gene

Subcategory (RNA class) for ODF2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ODF2-AS1 Gene

  • ODF2 Antisense RNA 1 2 3 5

External Ids for ODF2-AS1 Gene

Previous GeneCards Identifiers for ODF2-AS1 Gene

  • GC00U935917

Summaries for ODF2-AS1 Gene

GeneCards Summary for ODF2-AS1 Gene

ODF2-AS1 (ODF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ODF2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ODF2-AS1 Gene

Genomics for ODF2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ODF2-AS1 Gene

Promoters and enhancers for ODF2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J128472 Enhancer 0.2 Ensembl 600.7 -0.4 -389 1.6 ODF2-AS1 GC09P128485 ODF2
GH09J128503 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.3 -31.7 -31730 2.5 HDGF SP1 CC2D1A ZFX ELF3 MNT NKRF POLR2A RERE GTF2F1 GLE1 COQ4 ODF2-AS1 WDR34 PKN3 SPTAN1 ENSG00000228395 URM1 FPGS GOLGA2
GH09J127962 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +499.7 499664 22.2 SP1 ZFX ELF3 ZNF148 NKRF POLR2A MLLT1 ZNF121 CEBPG ZNF687 LOC100129352 PIP5KL1 NAIF1 DPM2 NUP188 ENSG00000227218 ZNF79 ODF2 GLE1 SLC25A25
GH09J128493 Enhancer 1 Ensembl ENCODE 11.2 -22.0 -22021 3 ZNF473 NFIB MAFK SP1 GMEB1 RXRA IKZF1 ZNF544 RFX1 ZBTB33 ODF2 NUP188 ENSG00000273186 ODF2-AS1 NAIF1 ENSG00000267834 GC09P128485 GLE1
GH09J128470 Enhancer 0.3 Ensembl 0.7 +2.4 2411 0.8 POLR2A PIR39360 ODF2-AS1 ODF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ODF2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ODF2-AS1 Gene

Genomic Locations for ODF2-AS1 Gene
chr9:128,468,957-128,473,012
(GRCh38/hg38)
Size:
4,056 bases
Orientation:
Minus strand

Genomic View for ODF2-AS1 Gene

Genes around ODF2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ODF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ODF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ODF2-AS1 Gene

Proteins for ODF2-AS1 Gene

Post-translational modifications for ODF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ODF2-AS1 Gene

Domains & Families for ODF2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ODF2-AS1 Gene

Function for ODF2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ODF2-AS1 Gene

Localization for ODF2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ODF2-AS1 Gene

Pathways & Interactions for ODF2-AS1 Gene

PathCards logo

SuperPathways for ODF2-AS1 Gene

No Data Available

Interacting Proteins for ODF2-AS1 Gene

Gene Ontology (GO) - Biological Process for ODF2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ODF2-AS1 Gene

Drugs & Compounds for ODF2-AS1 Gene

No Compound Related Data Available

Transcripts for ODF2-AS1 Gene

mRNA/cDNA for ODF2-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ODF2-AS1 Gene

No ASD Table

Relevant External Links for ODF2-AS1 Gene

GeneLoc Exon Structure for
ODF2-AS1
ECgene alternative splicing isoforms for
ODF2-AS1

Expression for ODF2-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ODF2-AS1 Gene

Orthologs for ODF2-AS1 Gene

Evolution for ODF2-AS1 Gene

ENSEMBL:
Gene Tree for ODF2-AS1 (if available)
TreeFam:
Gene Tree for ODF2-AS1 (if available)

No data available for Orthologs for ODF2-AS1 Gene

Paralogs for ODF2-AS1 Gene

No data available for Paralogs for ODF2-AS1 Gene

Variants for ODF2-AS1 Gene

Additional Variant Information for ODF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ODF2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ODF2-AS1 Gene

Disorders for ODF2-AS1 Gene

No disorders were found for ODF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ODF2-AS1 Gene

Publications for ODF2-AS1 Gene

No publications were found for ODF2-AS1 Gene.

Products for ODF2-AS1 Gene

Sources for ODF2-AS1 Gene

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