Aliases for ODF2-AS1 Gene

Data sources for ODF2-AS1 Gene:

RNA type for ODF2-AS1 Gene

lncRNA

Aliases for ODF2-AS1 Gene

External Ids for ODF2-AS1 Gene

Previous GeneCards Identifiers for ODF2-AS1 Gene

  • GC00U935917

Summaries for ODF2-AS1 Gene

GeneCards Summary for ODF2-AS1 Gene

ODF2-AS1 (ODF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ODF2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ODF2-AS1 Gene

Genomics for ODF2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ODF2-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ODF2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ODF2-AS1 Gene

Latest Assembly
chr9:128,468,925-128,473,013
(GRCh38/hg38)
Size:
4,089 bases
Orientation:
Minus strand

Previous Assembly
chr9:131,231,204-131,235,291
(GRCh37/hg19 by Entrez Gene)
Size:
4,088 bases
Orientation:
Minus strand

chr9:131,231,236-131,235,291
(GRCh37/hg19 by Ensembl)
Size:
4,056 bases
Orientation:
Minus strand

Genomic View for ODF2-AS1 Gene

Genes around ODF2-AS1 on UCSC Golden Path with GeneCards custom track
ODF2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ODF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ODF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ODF2-AS1 Gene

Proteins for ODF2-AS1 Gene

Post-translational modifications for ODF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ODF2-AS1 Gene

Domains & Families for ODF2-AS1 Gene

Gene Families for ODF2-AS1 Gene

genes like me logo Genes that share domains with ODF2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ODF2-AS1 Gene

Function for ODF2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ODF2-AS1 Gene

Localization for ODF2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ODF2-AS1 Gene

Pathways & Interactions for ODF2-AS1 Gene

PathCards logo

SuperPathways for ODF2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ODF2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ODF2-AS1 Gene

Drugs & Compounds for ODF2-AS1 Gene

No Compound Related Data Available

Transcripts for ODF2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ODF2-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00005A7032_9606 lncRNA 409 4

Ensembl: ENST00000420801 (view in UCSC) ,

LncBook: HSALNT0155727,

LNCipedia: ODF2-AS1:1,

NONCODE: NONHSAT134957.2,

URS000212313C_9606 lncRNA 439 1

RefSeq: NR_170291,

URS00009B98BD_9606 lncRNA 407 2

LncBook: HSALNT0155728,

NONCODE: NONHSAT221369.1,

ODF2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ODF2-AS1 Gene

No ASD Table

Relevant External Links for ODF2-AS1 Gene

GeneLoc Exon Structure for
ODF2-AS1

No data available for mRNA/cDNA for ODF2-AS1 Gene

Expression for ODF2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ODF2-AS1 Gene

genes like me logo Genes that share expression patterns with ODF2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ODF2-AS1 Gene

Orthologs for ODF2-AS1 Gene

Evolution for ODF2-AS1 Gene

ENSEMBL:
Gene Tree for ODF2-AS1 (if available)
TreeFam:
Gene Tree for ODF2-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for ODF2-AS1

No data available for Orthologs for ODF2-AS1 Gene

Paralogs for ODF2-AS1 Gene

No data available for Paralogs for ODF2-AS1 Gene

Variants for ODF2-AS1 Gene

Additional Variant Information for ODF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ODF2-AS1
Leiden Open Variation Database (LOVD)
ODF2-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ODF2-AS1 Gene

Disorders for ODF2-AS1 Gene

No disorders were found for ODF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ODF2-AS1 Gene

Publications for ODF2-AS1 Gene

No publications were found for ODF2-AS1 Gene.

Products for ODF2-AS1 Gene

Sources for ODF2-AS1 Gene