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Aliases for ODF2-AS1 Gene

Subcategory (RNA class) for ODF2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ODF2-AS1 Gene

  • ODF2 Antisense RNA 1 2 3 5

External Ids for ODF2-AS1 Gene

Previous GeneCards Identifiers for ODF2-AS1 Gene

  • GC00U935917

Summaries for ODF2-AS1 Gene

GeneCards Summary for ODF2-AS1 Gene

ODF2-AS1 (ODF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ODF2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ODF2-AS1 Gene

Genomics for ODF2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ODF2-AS1 Gene

Promoters and enhancers for ODF2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I127962 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.9 +499.7 499664 22.2 FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC PPARGC1A MEF2D FAM102A PIP5KL1 NAIF1 DPM2 ENSG00000272593 NUP188 ENSG00000227218 ZNF79 ODF2 GLE1
GH09I128503 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.3 -31.7 -31713 2.5 HDGF MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B SLC30A9 POLR2B ZNF207 GLE1 NAIF1 COQ4 ODF2-AS1 NUP188 WDR34 SPTAN1 LOC101929270 RNU7-171P
GH09I128493 Enhancer 0.8 ENCODE 11.2 -22.0 -22021 3 HDAC1 PKNOX1 SMAD1 ZNF473 NFIB ARID4B RAD21 TCF12 ETV6 CREM ODF2 NUP188 ENSG00000273186 ODF2-AS1 NAIF1 LOC101929314 GC09P128485 GLE1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ODF2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ODF2-AS1 Gene

Genomic Locations for ODF2-AS1 Gene
chr9:128,468,957-128,473,012
(GRCh38/hg38)
Size:
4,056 bases
Orientation:
Minus strand

Genomic View for ODF2-AS1 Gene

Genes around ODF2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ODF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ODF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ODF2-AS1 Gene

Proteins for ODF2-AS1 Gene

Post-translational modifications for ODF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ODF2-AS1 Gene

Domains & Families for ODF2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ODF2-AS1 Gene

Function for ODF2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ODF2-AS1 Gene

Localization for ODF2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ODF2-AS1 Gene

Pathways & Interactions for ODF2-AS1 Gene

SuperPathways for ODF2-AS1 Gene

No Data Available

Interacting Proteins for ODF2-AS1 Gene

Gene Ontology (GO) - Biological Process for ODF2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ODF2-AS1 Gene

Drugs & Compounds for ODF2-AS1 Gene

No Compound Related Data Available

Transcripts for ODF2-AS1 Gene

mRNA/cDNA for ODF2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ODF2-AS1 Gene

No ASD Table

Relevant External Links for ODF2-AS1 Gene

GeneLoc Exon Structure for
ODF2-AS1
ECgene alternative splicing isoforms for
ODF2-AS1

Expression for ODF2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ODF2-AS1 Gene

genes like me logo Genes that share expression patterns with ODF2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ODF2-AS1 Gene

Orthologs for ODF2-AS1 Gene

Evolution for ODF2-AS1 Gene

ENSEMBL:
Gene Tree for ODF2-AS1 (if available)
TreeFam:
Gene Tree for ODF2-AS1 (if available)

No data available for Orthologs for ODF2-AS1 Gene

Paralogs for ODF2-AS1 Gene

No data available for Paralogs for ODF2-AS1 Gene

Variants for ODF2-AS1 Gene

Additional Variant Information for ODF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ODF2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ODF2-AS1 Gene

Disorders for ODF2-AS1 Gene

No disorders were found for ODF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ODF2-AS1 Gene

Publications for ODF2-AS1 Gene

No publications were found for ODF2-AS1 Gene.

Products for ODF2-AS1 Gene

Sources for ODF2-AS1 Gene

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