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Aliases for OCIAD1-AS1 Gene

Subcategory (RNA class) for OCIAD1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for OCIAD1-AS1 Gene

  • OCIAD1 Antisense RNA 1 2 3 5
  • OCIAD1 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for OCIAD1-AS1 Gene

Summaries for OCIAD1-AS1 Gene

GeneCards Summary for OCIAD1-AS1 Gene

OCIAD1-AS1 (OCIAD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OCIAD1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OCIAD1-AS1 Gene

Genomics for OCIAD1-AS1 Gene

GeneHancer (GH) Regulatory Elements for OCIAD1-AS1 Gene

Promoters and enhancers for OCIAD1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J048830 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.5 +28.4 28449 3.1 SP1 CC2D1A ZFX ZNF148 NKRF MLLT1 POLR2A GTF2F1 ZNF687 NFRKB OCIAD1 NFXL1 OCIAD2 OCIAD1-AS1
GH04J048632 Enhancer 1 Ensembl ENCODE dbSUPER 10.2 +225.2 225202 6.4 PRDM1 ZNF24 SOX13 FOXA2 JUN FOS RARA PRDM6 JUND SOX5 OCIAD1 OCIAD1-AS1 SLC10A4 GC04P048658 RNU5E-3P FRYL
GH04J048968 Enhancer 1 Ensembl ENCODE dbSUPER 9.8 -109.0 -109004 4 PRDM10 REST ZNF629 ZNF316 CEBPB NFE2 FOS DPF2 ZNF335 CEBPG FRYL OCIAD2 OCIAD1-AS1 CWH43 GC04M048853
GH04J048629 Enhancer 0.9 Ensembl dbSUPER 10.2 +230.4 230402 0.4 CC2D1A CBFA2T2 SMARCA4 GMEB1 IKZF1 PKNOX1 ZNF24 EP300 CTBP1 EHMT2 OCIAD1-AS1 GC04P048658 RNU5E-3P FRYL
GH04J048578 Enhancer 0.9 Ensembl ENCODE 9.8 +281.7 281702 0.6 CC2D1A CTCF PRDM1 RAD21 RXRA ARID2 IKZF1 PHF21A REST TRIM22 OCIAD2 ZAR1 OCIAD1-AS1 SLC10A4 RNU5E-3P GC04P048658 FRYL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around OCIAD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OCIAD1-AS1 Gene

Genomic Locations for OCIAD1-AS1 Gene
chr4:48,852,008-48,860,203
(GRCh38/hg38)
Size:
8,196 bases
Orientation:
Minus strand
chr4:48,854,025-48,862,220
(GRCh37/hg19)
Size:
8,196 bases
Orientation:
Minus strand

Genomic View for OCIAD1-AS1 Gene

Genes around OCIAD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OCIAD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OCIAD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OCIAD1-AS1 Gene

Proteins for OCIAD1-AS1 Gene

Post-translational modifications for OCIAD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OCIAD1-AS1 Gene

Domains & Families for OCIAD1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OCIAD1-AS1 Gene

Function for OCIAD1-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OCIAD1-AS1 Gene

Localization for OCIAD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OCIAD1-AS1 Gene

Pathways & Interactions for OCIAD1-AS1 Gene

PathCards logo

SuperPathways for OCIAD1-AS1 Gene

No Data Available

Interacting Proteins for OCIAD1-AS1 Gene

Gene Ontology (GO) - Biological Process for OCIAD1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OCIAD1-AS1 Gene

Drugs & Compounds for OCIAD1-AS1 Gene

No Compound Related Data Available

Transcripts for OCIAD1-AS1 Gene

mRNA/cDNA for OCIAD1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for OCIAD1-AS1 Gene

No ASD Table

Relevant External Links for OCIAD1-AS1 Gene

GeneLoc Exon Structure for
OCIAD1-AS1
ECgene alternative splicing isoforms for
OCIAD1-AS1

Expression for OCIAD1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OCIAD1-AS1 Gene

genes like me logo Genes that share expression patterns with OCIAD1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OCIAD1-AS1 Gene

Orthologs for OCIAD1-AS1 Gene

Evolution for OCIAD1-AS1 Gene

ENSEMBL:
Gene Tree for OCIAD1-AS1 (if available)
TreeFam:
Gene Tree for OCIAD1-AS1 (if available)

No data available for Orthologs for OCIAD1-AS1 Gene

Paralogs for OCIAD1-AS1 Gene

No data available for Paralogs for OCIAD1-AS1 Gene

Variants for OCIAD1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OCIAD1-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000062002 -- 48,861,820(-) G/A upstream_transcript_variant
rs1001166279 -- 48,859,682(-) C/G intron_variant
rs1001239794 -- 48,859,254(-) T/C intron_variant
rs1002402815 -- 48,852,057(-) G/A non_coding_transcript_variant
rs1002839766 -- 48,857,974(-) C/T intron_variant

Additional Variant Information for OCIAD1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OCIAD1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OCIAD1-AS1 Gene

Disorders for OCIAD1-AS1 Gene

Additional Disease Information for OCIAD1-AS1

No disorders were found for OCIAD1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OCIAD1-AS1 Gene

Publications for OCIAD1-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

No data available for External Links for OCIAD1-AS1 Gene

Products for OCIAD1-AS1 Gene

Sources for OCIAD1-AS1 Gene

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