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Aliases for OATP1 Gene

Aliases for OATP1 Gene

  • Ornithine Aminotransferase Pseudogene 1 2 3
  • Ornithine Aminotransferase-Like 3 (Pseudogene) 2 3
  • OATL3 3

External Ids for OATP1 Gene

Previous HGNC Symbols for OATP1 Gene

  • OATL3

Previous GeneCards Identifiers for OATP1 Gene

  • GC10M126132

Summaries for OATP1 Gene

GeneCards Summary for OATP1 Gene

OATP1 (Ornithine Aminotransferase Pseudogene 1) is a Pseudogene.

Additional gene information for OATP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OATP1 Gene

Genomics for OATP1 Gene

GeneHancer (GH) Regulatory Elements for OATP1 Gene

Promoters and enhancers for OATP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I124444 Enhancer 0.3 dbSUPER 550.8 -0.8 -843 1.8 EZH2 GC10M124446 OATP1 NKX1-2
GH10I124434 Enhancer 0.9 ENCODE dbSUPER 0.4 +8.7 8736 2.8 PKNOX1 TFAP4 FOXA2 SAP130 ZNF384 CEBPG FEZF1 ZNF121 ATF7 ETV6 OAT ZRANB1 OATP1
GH10I124427 Enhancer 0.9 ENCODE dbSUPER 0.4 +15.3 15338 3.1 BCOR ZNF362 NFIA HLF ZMYM3 OSR2 ZNF121 ZNF335 ZFHX2 ZNF512B NKX1-2 CHST15 FAM53B OAT OATP1
GH10I124439 Enhancer 0.4 ENCODE 0.8 +4.2 4196 0.2 JUND FOS OATP1 OAT
GH10I124424 Enhancer 0.7 ENCODE dbSUPER 0.4 +18.6 18570 1.4 GATA3 FOXA2 JUND CEBPA HMG20A HNF4A BCL6 NKX1-2 CHST15 FAM53B OAT OATP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OATP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OATP1 Gene

Genomic Locations for OATP1 Gene
chr10:124,443,784-124,444,243
(GRCh38/hg38)
Size:
460 bases
Orientation:
Minus strand
chr10:126,132,353-126,132,812
(GRCh37/hg19)

Genomic View for OATP1 Gene

Genes around OATP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OATP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OATP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OATP1 Gene

Proteins for OATP1 Gene

Post-translational modifications for OATP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OATP1 Gene

Domains & Families for OATP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OATP1 Gene

Function for OATP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OATP1 Gene

Localization for OATP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OATP1 Gene

Pathways & Interactions for OATP1 Gene

SuperPathways for OATP1 Gene

No Data Available

Interacting Proteins for OATP1 Gene

Gene Ontology (GO) - Biological Process for OATP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OATP1 Gene

Drugs & Compounds for OATP1 Gene

No Compound Related Data Available

Transcripts for OATP1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OATP1 Gene

No ASD Table

Relevant External Links for OATP1 Gene

GeneLoc Exon Structure for
OATP1
ECgene alternative splicing isoforms for
OATP1

No data available for mRNA/cDNA for OATP1 Gene

Expression for OATP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of OATP1 Gene:

OATP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OATP1 Gene

Orthologs for OATP1 Gene

No data available for Orthologs and Evolution for OATP1 Gene

Paralogs for OATP1 Gene

No data available for Paralogs for OATP1 Gene

Variants for OATP1 Gene

Additional Variant Information for OATP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OATP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OATP1 Gene

Disorders for OATP1 Gene

No disorders were found for OATP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OATP1 Gene

Publications for OATP1 Gene

  1. Isolation and characterization of an ornithine aminotransferase-related sequence (OATL3) mapping to 10q26. (PMID: 8406505) Geraghty MT … Valle D (Genomics 1993) 2 3 58

Products for OATP1 Gene

Sources for OATP1 Gene

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