Aliases for NXNP1 Gene

Aliases for NXNP1 Gene

  • Nucleoredoxin Pseudogene 1 2 3 5
  • NXNP1 5

External Ids for NXNP1 Gene

Summaries for NXNP1 Gene

GeneCards Summary for NXNP1 Gene

NXNP1 (Nucleoredoxin Pseudogene 1) is a Pseudogene.

Additional gene information for NXNP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NXNP1 Gene

Genomics for NXNP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NXNP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J218878 Enhancer 0.7 Ensembl ENCODE 0.7 +4.1 4149 1 NFE2 ZNF316 MAFF MAFK MAFG NFE2L2 JUN BACH1 EMSY HSALNG0010623 NXNP1 lnc-ZC3H11B-12 LYPLAL1 TGFB2
GH01J218873 Enhancer 0.7 Ensembl ENCODE 0.4 +8.1 8142 1.8 CEBPA CEBPB USF1 FOS HCFC1 FOSL2 JUN JUND ARID3A HSALNG0010623 NXNP1 lnc-ZC3H11B-12 LYPLAL1 TGFB2
GH01J218865 Enhancer 0.5 Ensembl 0.4 +17.0 17049 0.8 CEBPB SP1 FOSL2 HNF4A HLF BCL3 NR3C1 RXRA HSALNG0010623 HSALNG0010618 NXNP1 LYPLAL1 TGFB2
GH01J218845 Enhancer 0.4 Ensembl 0.3 +36.4 36449 1.6 CREB1 SPI1 ZNF146 HSALNG0010618 HSALNG0010623 NXNP1 LOC105372924 LYPLAL1 TGFB2
GH01J218864 Enhancer 0.3 Ensembl 0.4 +18.5 18549 0.2 CEBPB HSALNG0010623 HSALNG0010618 NXNP1 LYPLAL1 TGFB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NXNP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NXNP1 Gene

Genomic Locations for NXNP1 Gene
chr1:218,843,762-218,882,650
(GRCh38/hg38)
Size:
38,889 bases
Orientation:
Minus strand
chr1:219,015,464-219,073,261
(GRCh37/hg19)
Size:
57,798 bases
Orientation:
Minus strand

Genomic View for NXNP1 Gene

Genes around NXNP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NXNP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NXNP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NXNP1 Gene

Proteins for NXNP1 Gene

No data available for DME Specific Peptides for NXNP1 Gene

Domains & Families for NXNP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NXNP1 Gene

Function for NXNP1 Gene

Phenotypes From GWAS Catalog for NXNP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NXNP1 Gene

Localization for NXNP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NXNP1 Gene

Pathways & Interactions for NXNP1 Gene

PathCards logo

SuperPathways for NXNP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NXNP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NXNP1 Gene

Drugs & Compounds for NXNP1 Gene

No Compound Related Data Available

Transcripts for NXNP1 Gene

mRNA/cDNA for NXNP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NXNP1 Gene

No ASD Table

Relevant External Links for NXNP1 Gene

GeneLoc Exon Structure for
NXNP1

Expression for NXNP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NXNP1 Gene

genes like me logo Genes that share expression patterns with NXNP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NXNP1 Gene

Orthologs for NXNP1 Gene

Evolution for NXNP1 Gene

ENSEMBL:
Gene Tree for NXNP1 (if available)
TreeFam:
Gene Tree for NXNP1 (if available)

No data available for Orthologs for NXNP1 Gene

Paralogs for NXNP1 Gene

No data available for Paralogs for NXNP1 Gene

Variants for NXNP1 Gene

Additional Variant Information for NXNP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NXNP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NXNP1 Gene

Disorders for NXNP1 Gene

No disorders were found for NXNP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NXNP1 Gene

Publications for NXNP1 Gene

No publications were found for NXNP1 Gene.

No data available for Mastermind for NXNP1 Gene

Products for NXNP1 Gene

Sources for NXNP1 Gene