NUP50P2 Gene (Pseudogene)

Nucleoporin 50 Pseudogene 2

GC06P025139
GIFtS:
6
See more...

Aliases for NUP50P2 Gene

Aliases for NUP50P2 Gene

  • Nucleoporin 50 Pseudogene 2 2 3
  • Nucleoporin 50kDa Pseudogene 3

External Ids for NUP50P2 Gene

Previous GeneCards Identifiers for NUP50P2 Gene

  • GC06P025249

Summaries for NUP50P2 Gene

GeneCards Summary for NUP50P2 Gene

NUP50P2 (Nucleoporin 50 Pseudogene 2) is a Pseudogene.

Additional gene information for NUP50P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NUP50P2 Gene

Genomics for NUP50P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for NUP50P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J025135 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -2.0 -1986 5 REST POLR2A RELA ZSCAN4 SMAD5 IKZF2 RCOR1 TRIM22 CTCF YY1 NUP50P2 lnc-RIPOR2-7 CMAHP C6orf62 ENSG00000219682 lnc-RIPOR2-5 piR-50437-557 RIPOR2 CARMIL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NUP50P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NUP50P2 Gene

Genomic Locations for NUP50P2 Gene
chr6:25,139,664-25,141,641
(GRCh38/hg38)
Size:
1,978 bases
Orientation:
Plus strand
chr6:25,140,072-25,141,767
(GRCh37/hg19)
Size:
1,696 bases
Orientation:
Plus strand

Genomic View for NUP50P2 Gene

Genes around NUP50P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUP50P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUP50P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NUP50P2 Gene

Proteins for NUP50P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NUP50P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP50P2 Gene

Domains & Families for NUP50P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NUP50P2 Gene

Function for NUP50P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for NUP50P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUP50P2 Gene

Localization for NUP50P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NUP50P2 Gene

Pathways & Interactions for NUP50P2 Gene

PathCards logo

SuperPathways for NUP50P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NUP50P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NUP50P2 Gene

Drugs & Compounds for NUP50P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for NUP50P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUP50P2 Gene

No ASD Table

Relevant External Links for NUP50P2 Gene

GeneLoc Exon Structure for
NUP50P2

No data available for mRNA/cDNA for NUP50P2 Gene

Expression for NUP50P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NUP50P2 Gene

mRNA expression in normal human tissues for NUP50P2 Gene
mRNA expression by GTEx for NUP50P2 Gene
genes like me logo Genes that share expression patterns with NUP50P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUP50P2 Gene

Orthologs for NUP50P2 Gene

No data available for Orthologs and Evolution for NUP50P2 Gene

Paralogs for NUP50P2 Gene

No data available for Paralogs for NUP50P2 Gene

Variants for NUP50P2 Gene

Additional Variant Information for NUP50P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUP50P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NUP50P2 Gene

Disorders for NUP50P2 Gene

Additional Disease Information for NUP50P2

Genetic Association Database
(GAD)

No disorders were found for NUP50P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUP50P2 Gene

Publications for NUP50P2 Gene

No publications were found for NUP50P2 Gene.

No data available for Mastermind for NUP50P2 Gene

Products for NUP50P2 Gene

Sources for NUP50P2 Gene