Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NUP50P2 Gene

Aliases for NUP50P2 Gene

  • Nucleoporin 50 Pseudogene 2 2 3
  • AL133268.1 5

External Ids for NUP50P2 Gene

Previous GeneCards Identifiers for NUP50P2 Gene

  • GC06P025249

Summaries for NUP50P2 Gene

GeneCards Summary for NUP50P2 Gene

NUP50P2 (Nucleoporin 50 Pseudogene 2) is a Pseudogene.

Additional gene information for NUP50P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUP50P2 Gene

Genomics for NUP50P2 Gene

GeneHancer (GH) Regulatory Elements for NUP50P2 Gene

Promoters and enhancers for NUP50P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I026120 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 22.4 +984.1 984130 7.8 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 SP3 NFYC SSRP1 HIST1H2AC PIR32750 PIR33095 PIR44445 HIST1H2BC ABT1 HMGN4 BTN2A3P BTN2A1 BTN2A2
GH06I026019 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 22.4 +887.7 887742 16.2 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 HIST1H3A HIST1H3B HIST1H4B HIST1H2AB HIST1H4A ABT1 HMGN4 BTN2A1 BTN2A3P BTN2A2
GH06I026052 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 22.4 +915.5 915459 5.7 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 GC06M026056 GC06M026057 GC06M026058 GC06M026059 GC06M026061 HIST1H1C ABT1 HMGN4 ENSG00000272462 BTN2A1
GH06I024657 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.3 -476.1 -476091 11.6 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 ACOT13 C6orf62 TDP2 KIAA0319 NUP50P2 ENSG00000272402 ENSG00000282804
GH06I024925 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13 -205.9 -205886 16.4 HDGF PKNOX1 FOXA2 SMAD1 YBX1 GLI4 IRF4 TCF12 ZNF302 ARID2 RIPOR2 LOC105374981 NUP50P2 ENSG00000272053 TDP2 ALDH5A1 C6orf62 MTCO2P33
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NUP50P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NUP50P2 Gene

Genomic Locations for NUP50P2 Gene
chr6:25,139,844-25,141,539
(GRCh38/hg38)
Size:
1,696 bases
Orientation:
Plus strand
chr6:25,140,072-25,141,767
(GRCh37/hg19)

Genomic View for NUP50P2 Gene

Genes around NUP50P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUP50P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUP50P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUP50P2 Gene

Proteins for NUP50P2 Gene

Post-translational modifications for NUP50P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP50P2 Gene

Domains & Families for NUP50P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUP50P2 Gene

Function for NUP50P2 Gene

Phenotypes From GWAS Catalog for NUP50P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUP50P2 Gene

Localization for NUP50P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NUP50P2 Gene

Pathways & Interactions for NUP50P2 Gene

SuperPathways for NUP50P2 Gene

No Data Available

Interacting Proteins for NUP50P2 Gene

Gene Ontology (GO) - Biological Process for NUP50P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUP50P2 Gene

Drugs & Compounds for NUP50P2 Gene

No Compound Related Data Available

Transcripts for NUP50P2 Gene

mRNA/cDNA for NUP50P2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUP50P2 Gene

No ASD Table

Relevant External Links for NUP50P2 Gene

GeneLoc Exon Structure for
NUP50P2
ECgene alternative splicing isoforms for
NUP50P2

Expression for NUP50P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NUP50P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of NUP50P2 Gene:

NUP50P2
genes like me logo Genes that share expression patterns with NUP50P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUP50P2 Gene

Orthologs for NUP50P2 Gene

Evolution for NUP50P2 Gene

ENSEMBL:
Gene Tree for NUP50P2 (if available)
TreeFam:
Gene Tree for NUP50P2 (if available)

No data available for Orthologs for NUP50P2 Gene

Paralogs for NUP50P2 Gene

No data available for Paralogs for NUP50P2 Gene

Variants for NUP50P2 Gene

Additional Variant Information for NUP50P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUP50P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NUP50P2 Gene

Disorders for NUP50P2 Gene

Additional Disease Information for NUP50P2

Genetic Association Database
(GAD)

No disorders were found for NUP50P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUP50P2 Gene

Publications for NUP50P2 Gene

No publications were found for NUP50P2 Gene.

Products for NUP50P2 Gene

Sources for NUP50P2 Gene

Content
Loading form....