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Aliases for NUP50P1 Gene

Aliases for NUP50P1 Gene

  • Nucleoporin 50 Pseudogene 1 2 3
  • Nucleoporin 50kDa Pseudogene 3
  • Nucleoporin 50 Pseudogene 2
  • AL049869.1 5
  • NUP50P 3

External Ids for NUP50P1 Gene

Previous HGNC Symbols for NUP50P1 Gene

  • NUP50P

Previous GeneCards Identifiers for NUP50P1 Gene

  • GC14M064137
  • GC14M065063

Summaries for NUP50P1 Gene

GeneCards Summary for NUP50P1 Gene

NUP50P1 (Nucleoporin 50 Pseudogene 1) is a Pseudogene.

Additional gene information for NUP50P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NUP50P1 Gene

Genomics for NUP50P1 Gene

GeneHancer (GH) Regulatory Elements for NUP50P1 Gene

Promoters and enhancers for NUP50P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I064610 Enhancer 0.8 Ensembl ENCODE 0.4 -9.8 -9803 2.5 JUN NR2F2 FOXA1 GATA3 JUND FOS FOSL2 NFE2 NFE2L2 SP7 HSPA2 PPP1R36 NUP50P1 GC14P064620
GH14I064618 Enhancer 0.6 ENCODE 0.4 -17.3 -17349 2.1 ZNF680 ZBTB21 ZNF223 ZNF664 ZNF791 ZNF213 POLR2A ZFP3 ZNF629 ZXDB GC14P064620 ZBTB1 ZBTB25 HSPA2 PPP1R36 NUP50P1
GH14I064614 Enhancer 0.4 ENCODE 0.4 -13.1 -13050 0.5 STAT1 USF2 NR2F2 PPP1R36 ZBTB25 ZBTB1 GC14P064620 NUP50P1
GH14I064613 Enhancer 0.2 ENCODE 0.4 -11.2 -11217 0.1 PPP1R36 HSPA2 GC14P064620 NUP50P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NUP50P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NUP50P1 Gene

Genomic Locations for NUP50P1 Gene
chr14:64,596,892-64,601,951
(GRCh38/hg38)
Size:
5,060 bases
Orientation:
Minus strand
chr14:65,063,610-65,068,669
(GRCh37/hg19)

Genomic View for NUP50P1 Gene

Genes around NUP50P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUP50P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUP50P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUP50P1 Gene

Proteins for NUP50P1 Gene

Post-translational modifications for NUP50P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUP50P1 Gene

Domains & Families for NUP50P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NUP50P1 Gene

Function for NUP50P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUP50P1 Gene

Localization for NUP50P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NUP50P1 Gene

Pathways & Interactions for NUP50P1 Gene

SuperPathways for NUP50P1 Gene

No Data Available

Interacting Proteins for NUP50P1 Gene

Gene Ontology (GO) - Biological Process for NUP50P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NUP50P1 Gene

Drugs & Compounds for NUP50P1 Gene

No Compound Related Data Available

Transcripts for NUP50P1 Gene

mRNA/cDNA for NUP50P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUP50P1 Gene

No ASD Table

Relevant External Links for NUP50P1 Gene

GeneLoc Exon Structure for
NUP50P1
ECgene alternative splicing isoforms for
NUP50P1

Expression for NUP50P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NUP50P1 Gene

mRNA differential expression in normal tissues according to GTEx for NUP50P1 Gene

This gene is overexpressed in Testis (x18.3).

NURSA nuclear receptor signaling pathways regulating expression of NUP50P1 Gene:

NUP50P1
genes like me logo Genes that share expression patterns with NUP50P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUP50P1 Gene

Orthologs for NUP50P1 Gene

Evolution for NUP50P1 Gene

ENSEMBL:
Gene Tree for NUP50P1 (if available)
TreeFam:
Gene Tree for NUP50P1 (if available)

No data available for Orthologs for NUP50P1 Gene

Paralogs for NUP50P1 Gene

No data available for Paralogs for NUP50P1 Gene

Variants for NUP50P1 Gene

Additional Variant Information for NUP50P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUP50P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NUP50P1 Gene

Disorders for NUP50P1 Gene

No disorders were found for NUP50P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NUP50P1 Gene

Publications for NUP50P1 Gene

No publications were found for NUP50P1 Gene.

Products for NUP50P1 Gene

Sources for NUP50P1 Gene

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