Aliases for NUDT9P1 Gene

Aliases for NUDT9P1 Gene

  • Nudix Hydrolase 9 Pseudogene 1 2 3 5
  • Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 9 Pseudogene 1 2 3
  • BA56M3.1 2 3
  • Chromosome 10 Open Reading Frame 98 2
  • C10orf98 3
  • MGC34007 2
  • NUDT9P1 5

External Ids for NUDT9P1 Gene

Previous HGNC Symbols for NUDT9P1 Gene

  • C10orf98

Previous GeneCards Identifiers for NUDT9P1 Gene

  • GC10U900622
  • GC10M092901

Summaries for NUDT9P1 Gene

GeneCards Summary for NUDT9P1 Gene

NUDT9P1 (Nudix Hydrolase 9 Pseudogene 1) is a Pseudogene.

Additional gene information for NUDT9P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NUDT9P1 Gene

Genomics for NUDT9P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NUDT9P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J091883 Promoter/Enhancer 1.9 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 9.9 -732.3 -732315 5.2 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 SOX13 KDM1A ZNF692 FOXA1 LARP7 HSALNG0079682 TNKS2-AS1 TNKS2 NUDT9P1 HECTD2 FGFBP3 ENSG00000273497 MN298678-010
GH10J091161 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 6.8 -10.1 -10055 4 HNRNPL CREB1 PRDM10 ZNF692 BACH1 JUND FOXA1 LARP7 RBFOX2 PATZ1 PCGF5 NONHSAG006518.2 lnc-PCGF5-6 ANKRD1 NUDT9P1 HECTD2 lnc-HECTD2-4
GH10J091197 Enhancer 0.8 ENCODE 7.2 -47.3 -47253 5.4 ZNF692 PRDM1 IKZF2 TRIM22 CEBPA SCRT2 YBX1 CEBPB SIN3A RELB piR-37926 NUDT9P1 ANKRD1 piR-57195-038 NONHSAG006518.2 PCGF5 HECTD2
GH10J091206 Enhancer 0.6 ENCODE 7 -53.4 -53374 0.4 CEBPA CEBPB SMAD4 NFIL3 TEAD3 RAD21 HLF CEBPG SPI1 ZNF644 NUDT9P1 piR-37926 piR-30709-001 NONHSAG006518.2 PCGF5 HECTD2
GH10J091215 Enhancer 0.7 FANTOM5 Ensembl 5.3 -62.3 -62251 2 GATAD2A ZNF316 MAFF MAFG MAFK EMSY NUDT9P1 piR-37926 piR-30709-001 NONHSAG006518.2 PCGF5 HECTD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NUDT9P1 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the NUDT9P1 gene promoter:
  • aMEF-2
  • AML1a
  • AREB6
  • HEN1
  • HSF2
  • HTF
  • IRF-2
  • MEF-2A
  • MyoD
  • Nkx5-1

Genomic Locations for NUDT9P1 Gene

Genomic Locations for NUDT9P1 Gene
chr10:91,151,995-91,153,349
(GRCh38/hg38)
Size:
1,355 bases
Orientation:
Minus strand
chr10:92,911,752-92,913,106
(GRCh37/hg19)
Size:
1,355 bases
Orientation:
Minus strand

Genomic View for NUDT9P1 Gene

Genes around NUDT9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUDT9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUDT9P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUDT9P1 Gene

Proteins for NUDT9P1 Gene

Post-translational modifications for NUDT9P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUDT9P1 Gene

Domains & Families for NUDT9P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NUDT9P1 Gene

Function for NUDT9P1 Gene

Phenotypes From GWAS Catalog for NUDT9P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUDT9P1 Gene

Localization for NUDT9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NUDT9P1 Gene

Pathways & Interactions for NUDT9P1 Gene

PathCards logo

SuperPathways for NUDT9P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NUDT9P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NUDT9P1 Gene

Drugs & Compounds for NUDT9P1 Gene

No Compound Related Data Available

Transcripts for NUDT9P1 Gene

mRNA/cDNA for NUDT9P1 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NUDT9P1 Gene

No ASD Table

Relevant External Links for NUDT9P1 Gene

GeneLoc Exon Structure for
NUDT9P1

Expression for NUDT9P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NUDT9P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NUDT9P1

SOURCE GeneReport for Unigene cluster for NUDT9P1 Gene:

Hs.441287
genes like me logo Genes that share expression patterns with NUDT9P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUDT9P1 Gene

Orthologs for NUDT9P1 Gene

Evolution for NUDT9P1 Gene

ENSEMBL:
Gene Tree for NUDT9P1 (if available)
TreeFam:
Gene Tree for NUDT9P1 (if available)

No data available for Orthologs for NUDT9P1 Gene

Paralogs for NUDT9P1 Gene

No data available for Paralogs for NUDT9P1 Gene

Variants for NUDT9P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for NUDT9P1 Gene

Variant ID Type Subtype PubMed ID
esv2759776 CNV loss 17122850
nsv1048584 CNV gain 25217958

Additional Variant Information for NUDT9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUDT9P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for NUDT9P1 Gene

Disorders for NUDT9P1 Gene

Additional Disease Information for NUDT9P1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for NUDT9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUDT9P1 Gene

Publications for NUDT9P1 Gene

  1. Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study. (PMID: 18521090) Lavedan C … Polymeropoulos MH (Molecular psychiatry 2009) 3 41
  2. Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia. (PMID: 19573479) Volpi S … Lavedan C (The Journal of clinical psychiatry 2009) 3 41
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3
  5. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual JF … Vidal M (Nature 2005) 3

Products for NUDT9P1 Gene

Sources for NUDT9P1 Gene