Aliases for NUDT16P1 Gene

Aliases for NUDT16P1 Gene

  • Nudix Hydrolase 16 Pseudogene 1 2 3 5
  • Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 16 Pseudogene 1 2 3
  • Nudix (Nucleoside Diphosphate Linked Moiety X)-Type Motif 16 Pseudogene 2
  • Nudix-Type Motif 16 Pseudogene 3
  • NUDT16P1 5
  • FLJ20525 2
  • NUDT16P 3

External Ids for NUDT16P1 Gene

Previous HGNC Symbols for NUDT16P1 Gene

  • NUDT16P

Previous GeneCards Identifiers for NUDT16P1 Gene

  • GC03P131080
  • GC03P128466

Summaries for NUDT16P1 Gene

GeneCards Summary for NUDT16P1 Gene

NUDT16P1 (Nudix Hydrolase 16 Pseudogene 1) is a Pseudogene.

Additional gene information for NUDT16P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NUDT16P1 Gene

Genomics for NUDT16P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NUDT16P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J131360 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 615.5 0.0 -44 2.8 TEAD4 REST RFX1 SP1 POLR2A ZFX EGR1 CTBP1 FOXA2 USF1 NUDT16P1 NEK11 lnc-NEK11-2 ENSG00000250608 NUDT16 LOC339874 ASTE1
GH03J131215 Enhancer 0.9 Ensembl ENCODE 7.4 -144.4 -144433 2.9 PRDM10 ZNF692 JUND PRDM1 ZIC2 PATZ1 ZNF341 ZNF561 KLF9 ZXDB NUDT16P1 NUDT16 piR-33905-055 piR-31937-139 ASTE1 NEK11
GH03J131223 Enhancer 0.4 Ensembl 7 -138.0 -138044 0.8 FOXA1 ZNF766 ZBTB40 GATA3 NEK11 ASTE1 NUDT16P1 NUDT16 piR-31937-139 piR-33905-055
GH03J131355 Enhancer 0.3 Ensembl ENCODE 7.5 -5.5 -5529 1.1 NUDT16P1 NUDT16 lnc-NEK11-2 RF00017-4117 LOC339874 ENSG00000250608 ASTE1
GH03J131365 Enhancer 0.2 Ensembl 11 +3.6 3556 0.8 NUDT16P1 NEK11 lnc-NUDT16-2 ENSG00000250608 NUDT16 LOC339874 ASTE1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NUDT16P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NUDT16P1 Gene

Genomic Locations for NUDT16P1 Gene
chr3:131,361,845-131,365,122
(GRCh38/hg38)
Size:
3,278 bases
Orientation:
Plus strand
chr3:131,080,689-131,083,966
(GRCh37/hg19)
Size:
3,278 bases
Orientation:
Plus strand

Genomic View for NUDT16P1 Gene

Genes around NUDT16P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NUDT16P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NUDT16P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NUDT16P1 Gene

Proteins for NUDT16P1 Gene

Post-translational modifications for NUDT16P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NUDT16P1 Gene

Domains & Families for NUDT16P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NUDT16P1 Gene

Function for NUDT16P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NUDT16P1 Gene

Localization for NUDT16P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NUDT16P1 Gene

Pathways & Interactions for NUDT16P1 Gene

PathCards logo

SuperPathways for NUDT16P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NUDT16P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NUDT16P1 Gene

Drugs & Compounds for NUDT16P1 Gene

No Compound Related Data Available

Transcripts for NUDT16P1 Gene

mRNA/cDNA for NUDT16P1 Gene

1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NUDT16P1 Gene

No ASD Table

Relevant External Links for NUDT16P1 Gene

GeneLoc Exon Structure for
NUDT16P1

Expression for NUDT16P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NUDT16P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NUDT16P1

SOURCE GeneReport for Unigene cluster for NUDT16P1 Gene:

Hs.380350
genes like me logo Genes that share expression patterns with NUDT16P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NUDT16P1 Gene

Orthologs for NUDT16P1 Gene

Evolution for NUDT16P1 Gene

ENSEMBL:
Gene Tree for NUDT16P1 (if available)
TreeFam:
Gene Tree for NUDT16P1 (if available)

No data available for Orthologs for NUDT16P1 Gene

Paralogs for NUDT16P1 Gene

No data available for Paralogs for NUDT16P1 Gene

Variants for NUDT16P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for NUDT16P1 Gene

Variant ID Type Subtype PubMed ID
dgv934e214 CNV loss 21293372
esv3597781 CNV gain 21293372
esv3597785 CNV gain 21293372
esv3597788 CNV gain 21293372

Additional Variant Information for NUDT16P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NUDT16P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for NUDT16P1 Gene

Disorders for NUDT16P1 Gene

Additional Disease Information for NUDT16P1

No disorders were found for NUDT16P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NUDT16P1 Gene

Publications for NUDT16P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
  2. PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling. (PMID: 31091453) Shami Shah A … Baskin JM (Cell reports 2019) 3
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for NUDT16P1 Gene

Sources for NUDT16P1 Gene