Aliases for NTM-AS1 Gene

Subcategory (RNA class) for NTM-AS1 Gene


Quality Score for this RNA gene is


Aliases for NTM-AS1 Gene

  • NTM Antisense RNA 1 2 3 4 5
  • C11orf39 3 4
  • NTM-AS1 2 170
  • Putative Uncharacterized Protein NTM-AS1 4
  • Chromosome 11 Open Reading Frame 39 2
  • NTM Antisense Gene Protein 1 4
  • HSALNG0088291 169
  • NONHSAG010073 94

External Ids for NTM-AS1 Gene

Previous HGNC Symbols for NTM-AS1 Gene

  • C11orf39

Previous GeneCards Identifiers for NTM-AS1 Gene

  • GC11M131663

Summaries for NTM-AS1 Gene

GeneCards Summary for NTM-AS1 Gene

NTM-AS1 (NTM Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NTM-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NTM-AS1 Gene

Genomics for NTM-AS1 Gene

GeneHancer (GH) Regulatory Elements for NTM-AS1 Gene

Promoters and enhancers for NTM-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J131661 Enhancer 0.6 Ensembl CraniofacialAtlas dbSUPER 750.6 +0.9 882 2.2 USF1 NTM-AS1 HSALNG0088290 NTM
GH11J131664 Enhancer 0.3 Ensembl dbSUPER 750.6 -0.9 -918 0.2 NTM-AS1 lnc-ADAMTS15-12 NTM
GH11J130915 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 12 +747.1 747116 2.7 ZNF24 ZBTB40 CTCF POLR2A HCFC1 MYC ELF1 RAD21 L3MBTL2 MAX SNX19 piR-44546-001 NTM-AS1 ENSG00000237654 ZBTB44 PRDM10
GH11J131687 Enhancer 0.5 Ensembl 11.2 -24.7 -24718 1 CTCF RBPJ ZNF143 RAD21 XRCC5 RB1 ZNF48 NTM-AS1 NTM lnc-ADAMTS15-12
GH11J131640 Enhancer 0.3 Ensembl ENCODE 11.7 +23.0 22982 1.2 NTM-AS1 NTM HSALNG0088290 ENSG00000285980
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NTM-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NTM-AS1 Gene

Genomic Locations for NTM-AS1 Gene
41,133 bases
Minus strand
1,453 bases
Minus strand

Genomic View for NTM-AS1 Gene

Genes around NTM-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NTM-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NTM-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NTM-AS1 Gene

Proteins for NTM-AS1 Gene

  • Protein details for NTM-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein NTM-AS1
    Protein Accession:

    Protein attributes for NTM-AS1 Gene

    140 amino acids
    Molecular mass:
    15188 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NTM-AS1 Gene

Post-translational modifications for NTM-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NTM-AS1 Gene

Domains & Families for NTM-AS1 Gene

Protein Domains for NTM-AS1 Gene

genes like me logo Genes that share domains with NTM-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NTM-AS1 Gene

Function for NTM-AS1 Gene

Phenotypes for NTM-AS1 Gene

genes like me logo Genes that share phenotypes with NTM-AS1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NTM-AS1 Gene

Localization for NTM-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NTM-AS1 Gene

Pathways & Interactions for NTM-AS1 Gene

PathCards logo

SuperPathways for NTM-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NTM-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NTM-AS1 Gene

Drugs & Compounds for NTM-AS1 Gene

No Compound Related Data Available

Transcripts for NTM-AS1 Gene

mRNA/cDNA for NTM-AS1 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(3) NONCODE transcripts :
(4) LNCipedia transcripts :
(1) LncBook transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NTM-AS1 Gene

No ASD Table

Relevant External Links for NTM-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NTM-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NTM-AS1 Gene

Orthologs for NTM-AS1 Gene

Evolution for NTM-AS1 Gene

Gene Tree for NTM-AS1 (if available)
Gene Tree for NTM-AS1 (if available)

No data available for Orthologs for NTM-AS1 Gene

Paralogs for NTM-AS1 Gene

No data available for Paralogs for NTM-AS1 Gene

Variants for NTM-AS1 Gene

Sequence variations from dbSNP and Humsavar for NTM-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000470084 -- 131,662,533(-) A/G intron_variant
rs1002058591 -- 131,663,542(-) C/A/T non_coding_transcript_variant
rs1003326869 -- 131,664,716(-) G/A upstream_transcript_variant
rs1003568243 -- 131,664,549(-) C/T upstream_transcript_variant
rs1003808681 -- 131,664,723(-) G/A upstream_transcript_variant

Additional Variant Information for NTM-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NTM-AS1 Gene

Disorders for NTM-AS1 Gene

Additional Disease Information for NTM-AS1

No disorders were found for NTM-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NTM-AS1 Gene

Publications for NTM-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 56
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 56

Products for NTM-AS1 Gene

Sources for NTM-AS1 Gene