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Aliases for NT5CP1 Gene

Subcategory (RNA class) for NT5CP1 Gene


Aliases for NT5CP1 Gene

  • 5',3'-Nucleotidase, Cytosolic Pseudogene 1 2 3 5
  • 5', 3'-Nucleotidase, Cytosolic Pseudogene 3

External Ids for NT5CP1 Gene

ORGUL Members for NT5CP1 Gene

Previous GeneCards Identifiers for NT5CP1 Gene

  • GC14U900119
  • GC14M072027
  • GC14M073107
  • GC14M074037

Summaries for NT5CP1 Gene

GeneCards Summary for NT5CP1 Gene

NT5CP1 (5',3'-Nucleotidase, Cytosolic Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for NT5CP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NT5CP1 Gene

Genomics for NT5CP1 Gene

GeneHancer (GH) Regulatory Elements for NT5CP1 Gene

Promoters and enhancers for NT5CP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J073572 Promoter 0.6 Ensembl 600.7 -0.1 -134 0.4 LARP7 GC14M073568 NT5CP1 ACOT2 ENSG00000279026
GH14J074564 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 16.6 -998.9 -998883 11.5 ZSCAN21 MAFK YY1 SP7 PRDM1 MLLT1 MZF1 FOSL2 POLR2A PKNOX1 ELMSAN1 YLPM1 ZNF410 ENSG00000259138 ENSG00000258559 MLH3 FCF1 PROX2 LTBP2 NT5CP1
GH14J073768 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 16.7 -200.2 -200152 7.3 SP1 ELF3 MNT CBFA2T2 NKRF RERE ZNF687 NFIB ZSCAN21 AHR ENSG00000258559 RBM25 YLPM1 ABCD4 NT5CP1 PTGR2 ENSG00000259065 PNMA1 ENSG00000223300 ELMSAN1
GH14J073717 Enhancer 0.9 ENCODE dbSUPER 16.7 -147.1 -147079 2.9 NFIB RXRA ZNF544 ZNF300 ZNF776 POLR2A SP1 ZNF37A ZBTB44 ZNF491 ENSG00000258559 RBM25 ABCD4 NT5CP1 DNAL1 PNMA1 ZNF410 ELMSAN1 ENSG00000259065 ACOT1
GH14J073567 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.7 +2.6 2566 4.6 ZNF652 ELF3 NKRF CEBPG RERE ZNF384 ZNF687 NFRKB MAFK YY1 ACOT2 GC14M073568 GC14M073564 ACOT1 ENSG00000259065 ENSG00000258695 DCAF4 DNAL1 NT5CP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NT5CP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NT5CP1 Gene

Genomic Locations for NT5CP1 Gene
671 bases
Minus strand
671 bases
Minus strand

Genomic View for NT5CP1 Gene

Genes around NT5CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NT5CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NT5CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NT5CP1 Gene

Proteins for NT5CP1 Gene

Post-translational modifications for NT5CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NT5CP1 Gene

Domains & Families for NT5CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NT5CP1 Gene

Function for NT5CP1 Gene

Phenotypes From GWAS Catalog for NT5CP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NT5CP1 Gene

Localization for NT5CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NT5CP1 Gene

Pathways & Interactions for NT5CP1 Gene

PathCards logo

SuperPathways for NT5CP1 Gene

No Data Available

Interacting Proteins for NT5CP1 Gene

Gene Ontology (GO) - Biological Process for NT5CP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NT5CP1 Gene

Drugs & Compounds for NT5CP1 Gene

No Compound Related Data Available

Transcripts for NT5CP1 Gene

mRNA/cDNA for NT5CP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NT5CP1 Gene

No ASD Table

Relevant External Links for NT5CP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NT5CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NT5CP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NT5CP1 Gene:

genes like me logo Genes that share expression patterns with NT5CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NT5CP1 Gene

Orthologs for NT5CP1 Gene

Evolution for NT5CP1 Gene

Gene Tree for NT5CP1 (if available)
Gene Tree for NT5CP1 (if available)

No data available for Orthologs for NT5CP1 Gene

Paralogs for NT5CP1 Gene

No data available for Paralogs for NT5CP1 Gene

Variants for NT5CP1 Gene

Additional Variant Information for NT5CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NT5CP1 Gene

Disorders for NT5CP1 Gene

No disorders were found for NT5CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NT5CP1 Gene

Publications for NT5CP1 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

No data available for External Links for NT5CP1 Gene

Products for NT5CP1 Gene

Sources for NT5CP1 Gene

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