Aliases for NSRP1P1 Gene

Aliases for NSRP1P1 Gene

  • Nuclear Speckle Splicing Regulatory Protein 1 Pseudogene 1 2 3 5
  • Coiled-Coil Domain Containing 55 Pseudogene 1 2 3
  • CCDC55P1 3
  • NSRP1P1 5

External Ids for NSRP1P1 Gene

Previous HGNC Symbols for NSRP1P1 Gene

  • CCDC55P1

Previous GeneCards Identifiers for NSRP1P1 Gene

  • GC01P078314

Summaries for NSRP1P1 Gene

GeneCards Summary for NSRP1P1 Gene

NSRP1P1 (Nuclear Speckle Splicing Regulatory Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for NSRP1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NSRP1P1 Gene

Genomics for NSRP1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NSRP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J077846 Enhancer 0.5 Ensembl 250.7 +0.3 320 1.6 ATF4 TCF7 EED RUNX3 PRDM1 NSRP1P1 piR-55704-001 MIGA1 RNA5SP21 ACTG1P21 NEXN HSPE1P25
GH01J078619 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE CraniofacialAtlas 15.5 +774.1 774141 4.4 BCLAF1 NFIC CEBPB TRIM22 ZNF148 CBFB ZNF132 NFE2 ZNF571 PRDM6 IFI44L ZZZ3 ENSG00000273338 NSRP1P1 FUBP1 IFI44 USP33 ENSG00000219201 lnc-ADGRL4-6 HSALNG0004628
GH01J078645 Enhancer 0.4 Ensembl 5 +798.9 798921 2.4 SPI1 HNF4A SP1 HNF4G NSRP1P1 IFI44 lnc-ADGRL4-6 HSALNG0004628 IFI44L
GH01J077829 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -14.4 -14439 6.7 IKZF1 JUND ZNF217 FOXA2 RUNX1 NFE2 PRDM6 GATA3 TCF7L2 FOXA1 RNA5SP21 MIGA1 ACTG1P21 USP33 IFI44 NEXN FUBP1 RF00017-220 NSRP1P1
GH01J077823 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -22.1 -22064 2.4 ZNF600 CEBPB CTCF SMC3 RAD21 SCRT1 JUND BHLHE40 HLF MYNN MIGA1 RNA5SP21 ACTG1P21 RF00017-220 NSRP1P1 NEXN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NSRP1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NSRP1P1 Gene

Latest Assembly
chr1:77,847,080-77,848,999
(GRCh38/hg38)
Size:
1,920 bases
Orientation:
Plus strand

Previous Assembly
chr1:78,312,765-78,314,684
(GRCh37/hg19 by Entrez Gene)
Size:
1,920 bases
Orientation:
Plus strand

chr1:78,312,795-78,314,487
(GRCh37/hg19 by Ensembl)
Size:
1,693 bases
Orientation:
Plus strand

Genomic View for NSRP1P1 Gene

Genes around NSRP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NSRP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NSRP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NSRP1P1 Gene

Proteins for NSRP1P1 Gene

Post-translational modifications for NSRP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NSRP1P1 Gene

Domains & Families for NSRP1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NSRP1P1 Gene

Function for NSRP1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NSRP1P1 Gene

Localization for NSRP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NSRP1P1 Gene

Pathways & Interactions for NSRP1P1 Gene

PathCards logo

SuperPathways for NSRP1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NSRP1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NSRP1P1 Gene

Drugs & Compounds for NSRP1P1 Gene

No Compound Related Data Available

Transcripts for NSRP1P1 Gene

mRNA/cDNA for NSRP1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NSRP1P1 Gene

No ASD Table

Relevant External Links for NSRP1P1 Gene

GeneLoc Exon Structure for
NSRP1P1

Expression for NSRP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NSRP1P1 Gene

genes like me logo Genes that share expression patterns with NSRP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NSRP1P1 Gene

Orthologs for NSRP1P1 Gene

Evolution for NSRP1P1 Gene

ENSEMBL:
Gene Tree for NSRP1P1 (if available)
TreeFam:
Gene Tree for NSRP1P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for NSRP1P1

No data available for Orthologs for NSRP1P1 Gene

Paralogs for NSRP1P1 Gene

No data available for Paralogs for NSRP1P1 Gene

Variants for NSRP1P1 Gene

Additional Variant Information for NSRP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NSRP1P1
Leiden Open Variation Database (LOVD)
NSRP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NSRP1P1 Gene

Disorders for NSRP1P1 Gene

No disorders were found for NSRP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NSRP1P1 Gene

Publications for NSRP1P1 Gene

No publications were found for NSRP1P1 Gene.

No data available for Mastermind for NSRP1P1 Gene

Products for NSRP1P1 Gene

Sources for NSRP1P1 Gene