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Aliases for NRG3-AS1 Gene
Subcategory (RNA class) for NRG3-AS1 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for NRG3-AS1 Gene
External Ids for NRG3-AS1 Gene
- HGNC: 31429
- Entrez Gene: 101929590
- Ensembl: ENSG00000225738
Previous HGNC Symbols for NRG3-AS1 Gene
- C10orf100
Previous GeneCards Identifiers for NRG3-AS1 Gene
- GC10M083988
Summaries for NRG3-AS1 Gene
GeneCards Summary for NRG3-AS1 Gene
NRG3-AS1 (NRG3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for NRG3-AS1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NRG3-AS1 Gene
Genomics for NRG3-AS1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for NRG3-AS1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J082176 | Enhancer | 0.3 | Ensembl | 10.9 | +56.2 | 56219 | 0.2 | POLR2A TRIM28 | ENSG00000229458 NRG3-AS1 ENSG00000285739 L13713-030 NRG3 | |
| GH10J082288 | Enhancer | 0.3 | ENCODE | 10.9 | -55.8 | -55821 | 1.3 | FOS | ENSG00000229458 NRG3-AS1 RNU6-441P piR-48373-001 NRG3 | |
| GH10J082211 | Enhancer | 0.2 | Ensembl | 12.5 | +21.4 | 21419 | 0.6 | ENSG00000285739 NRG3-AS1 ENSG00000229458 NRG3 | ||
| GH10J082200 | Enhancer | 0.2 | Ensembl | 11.6 | +32.5 | 32519 | 0.4 | ENSG00000229458 NRG3-AS1 ENSG00000285739 L13713-030 NRG3 | ||
| GH10J082251 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | -18.7 | -18681 | 1.6 | EZH2 BCL11A SMARCA4 MTA2 IKZF1 | ENSG00000229458 RNU6-441P NRG3-AS1 piR-48373-001 NRG3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around NRG3-AS1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for NRG3-AS1 Gene
Genomic Locations for NRG3-AS1 Gene
- chr10:82,228,985-82,232,920
- (GRCh38/hg38)
- Size:
- 3,936 bases
- Orientation:
- Minus strand
- chr10:83,988,741-83,992,676
- (GRCh37/hg19)
- Size:
- 3,936 bases
- Orientation:
- Minus strand
Genomic View for NRG3-AS1 Gene
Genes around NRG3-AS1 on UCSC Golden Path with GeneCards custom track
NRG3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 10q23.1 by HGNC
- 10q23.1 by Entrez Gene
- 10q23.1 by Ensembl
NRG3-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for NRG3-AS1 Gene
Proteins for NRG3-AS1 Gene
Post-translational modifications for NRG3-AS1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for NRG3-AS1
- Origene Custom Protein Services for NRG3-AS1
No data available for DME Specific Peptides for NRG3-AS1 Gene
Domains & Families for NRG3-AS1 Gene
Gene Families for NRG3-AS1 Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NRG3-AS1 Gene
Function for NRG3-AS1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NRG3-AS1 - Select products 50% OFF >
- * NRG3-AS1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for NRG3-AS1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for NRG3-AS1 - Select products 50% OFF >
- * NRG3-AS1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRG3-AS1 Gene
Localization for NRG3-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NRG3-AS1 Gene
Transcripts for NRG3-AS1 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for NRG3-AS1 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000075BCE0_9606 | lncRNA | 490 | 5 |
HGNC: 31429, RefSeq: NR_120666, LncBook: HSALNT0165403, LNCipedia: NRG3-AS1:2, NONCODE: NONHSAT157246.1, |
| URS00008BE8F1_9606 | lncRNA | 555 | 4 |
Ensembl: ENST00000448936 (view in UCSC) , LncBook: HSALNT0165404, LNCipedia: NRG3-AS1:3, NONCODE: NONHSAT015285.2, |
| URS00008BABE6_9606 | lncRNA | 280 | 3 |
Ensembl: ENST00000502725 (view in UCSC) , LncBook: HSALNT0165402, LNCipedia: NRG3-AS1:5, |
| URS00008B822A_9606 | lncRNA | 649 | 3 |
LncBook: HSALNT0165397, LNCipedia: NRG3-AS1:4, NONCODE: NONHSAT015282.2, |
| URS00008BDCA7_9606 | lncRNA | 550 | 3 |
LncBook: HSALNT0165405, LNCipedia: NRG3-AS1:1, NONCODE: NONHSAT015286.2, |
NRG3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for NRG3-AS1 Gene
- 5 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000505481 550 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NRG3-AS1 - Select products 50% OFF >
- * NRG3-AS1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for NRG3-AS1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for NRG3-AS1 - Select products 50% OFF >
- * NRG3-AS1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for NRG3-AS1 Gene
- GeneLoc Exon Structure for
- NRG3-AS1
Expression for NRG3-AS1 Gene
mRNA differential expression in normal tissues according to GTEx for NRG3-AS1 Gene
This gene is overexpressed in Testis (x41.2) and Pituitary (x5.0).
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRG3-AS1 Gene
Orthologs for NRG3-AS1 Gene
No data available for Orthologs for NRG3-AS1 Gene
Paralogs for NRG3-AS1 Gene
No data available for Paralogs for NRG3-AS1 Gene
Variants for NRG3-AS1 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3891873 | CNV | gain | 25118596 |
| esv3891875 | CNV | loss | 25118596 |
| nsv1141879 | OTHER | inversion | 24896259 |
| nsv551704 | CNV | loss | 21841781 |
Additional Variant Information for NRG3-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- NRG3-AS1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NRG3-AS1 Gene
Disorders for NRG3-AS1 Gene
Additional Disease Information for NRG3-AS1
No disorders were found for NRG3-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRG3-AS1 Gene
Publications for NRG3-AS1 Gene
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- A transcript finishing initiative for closing gaps in the human transcriptome. (PMID: 15197164) Sogayar MC … Ludwig-FAPESP Transcript Finishing Initiative (Genome research 2004) 3
- Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. (PMID: 7566098) Adams MD … White O (Nature 1995) 3
No data available for Mastermind for NRG3-AS1 Gene
Products for NRG3-AS1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for NRG3-AS1
- Origene Custom Protein Services for NRG3-AS1
- Browse OriGene Inhibitory RNA Products For NRG3-AS1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for NRG3-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For NRG3-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for NRG3-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for NRG3-AS1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for NRG3-AS1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for NRG3-AS1
Sources for NRG3-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB