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Aliases for NRAV Gene

Subcategory (RNA class) for NRAV Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NRAV Gene

  • Negative Regulator Of Antiviral Response (Non-Protein Coding) 2 3 5
  • DYNLL1 Antisense RNA 1 2 3
  • DYNLL1-AS1 3
  • DYNLL1AS1 3

External Ids for NRAV Gene

Previous HGNC Symbols for NRAV Gene

  • DYNLL1-AS1

Summaries for NRAV Gene

GeneCards Summary for NRAV Gene

NRAV (Negative Regulator Of Antiviral Response (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NRAV Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRAV Gene

Genomics for NRAV Gene

GeneHancer (GH) Regulatory Elements for NRAV Gene

Promoters and enhancers for NRAV Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I120494 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.7 -655 3.5 HDGF SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF213 E2F8 DYNLL1 NRAV GC12P120497 COQ5 GATC RPL29P24 RNF10 SRSF9 RPL31P52 TRIAP1
GH12I120473 Enhancer 1.1 Ensembl ENCODE 11.9 +21.3 21279 2 HDAC1 PKNOX1 NFIB NEUROD1 SIN3A ZBTB7B ZNF335 ZNF121 ARID2 ZNF366 COQ5 RPL31P52 TRIAP1 ENSG00000111780 NRAV COX6A1 PLA2G1B DYNLL1
GH12I120549 Enhancer 1.1 Ensembl ENCODE 11.2 -54.6 -54565 1.4 PKNOX1 FOXA2 ARID4B ETS1 YY1 SLC30A9 ATF7 RXRA SP5 REST COQ5 GATC COX6A1 RPL29P24 NRAV DYNLL1 SRSF9 RPL31P52 TRIAP1 ENSG00000111780
GH12I120487 Enhancer 0.8 ENCODE 0.4 +7.9 7870 1.2 HDAC1 PKNOX1 TAF9B ARNT TCF12 NCOA1 ZEB2 ZNF592 ZNF148 NFIC GATC COQ5 RPL31P52 TRIAP1 ENSG00000111780 COX6A1 NRAV DYNLL1
GH12I120479 Enhancer 0.8 ENCODE 0.4 +15.0 15027 2.8 HDAC1 PKNOX1 TCF12 CREM MEF2D KLF16 SMARCA4 IKZF1 ZNF341 HMBOX1 GATC TRIAP1 RPL31P52 ENSG00000111780 COX6A1 COQ5 MSI1 RPS27P25 DYNLL1 NRAV
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NRAV on UCSC Golden Path with GeneCards custom track

Genomic Locations for NRAV Gene

Genomic Locations for NRAV Gene
chr12:120,490,328-120,495,946
(GRCh38/hg38)
Size:
5,619 bases
Orientation:
Minus strand
chr12:120,928,131-120,933,749
(GRCh37/hg19)

Genomic View for NRAV Gene

Genes around NRAV on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRAV Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRAV Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NRAV Gene

Proteins for NRAV Gene

Post-translational modifications for NRAV Gene

No Post-translational modifications

No data available for DME Specific Peptides for NRAV Gene

Domains & Families for NRAV Gene

Gene Families for NRAV Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NRAV: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NRAV Gene

Function for NRAV Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRAV Gene

Localization for NRAV Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NRAV Gene

Pathways & Interactions for NRAV Gene

No Data Available

Interacting Proteins for NRAV Gene

Gene Ontology (GO) - Biological Process for NRAV Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NRAV Gene

Drugs & Compounds for NRAV Gene

No Compound Related Data Available

Transcripts for NRAV Gene

mRNA/cDNA for NRAV Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NRAV Gene

No ASD Table

Relevant External Links for NRAV Gene

GeneLoc Exon Structure for
NRAV
ECgene alternative splicing isoforms for
NRAV

Expression for NRAV Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NRAV Gene

NURSA nuclear receptor signaling pathways regulating expression of NRAV Gene:

NRAV
genes like me logo Genes that share expression patterns with NRAV: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRAV Gene

Orthologs for NRAV Gene

Evolution for NRAV Gene

ENSEMBL:
Gene Tree for NRAV (if available)
TreeFam:
Gene Tree for NRAV (if available)

No data available for Orthologs for NRAV Gene

Paralogs for NRAV Gene

No data available for Paralogs for NRAV Gene

Variants for NRAV Gene

Sequence variations from dbSNP and Humsavar for NRAV Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000718376 -- 120,497,873(-) C/T upstream_transcript_variant
rs1000978449 -- 120,497,642(-) T/G upstream_transcript_variant
rs1001173260 -- 120,492,365(-) C/T intron_variant
rs1001388662 -- 120,495,437(-) C/A intron_variant
rs1001649930 -- 120,495,198(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for NRAV Gene

Variant ID Type Subtype PubMed ID
nsv509482 CNV insertion 20534489

Additional Variant Information for NRAV Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRAV

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NRAV Gene

Disorders for NRAV Gene

Additional Disease Information for NRAV

No disorders were found for NRAV Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRAV Gene

Publications for NRAV Gene

  1. NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription. (PMID: 25525793) Ouyang J … Chen JL (Cell host & microbe 2014) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for NRAV Gene

Sources for NRAV Gene

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