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Aliases for NRAV Gene
Data sources for NRAV Gene:
Subcategory (RNA class) for NRAV Gene
lncRNA
Aliases for NRAV Gene
- Negative Regulator Of Antiviral Response (HGNC, NCBI Entrez Gene, Ensembl)
- Negative Regulator Of Antiviral Response (Non-Protein Coding) (HGNC, NCBI Entrez Gene)
- DYNLL1 Antisense RNA 1 (HGNC, NCBI Entrez Gene)
- NRAV (Ensembl, LNCipedia)
- NONHSAG012518.2 (NONCODE)
- HSALNG0094525 (LncBook)
- DYNLL1-AS1 (NCBI Entrez Gene)
- DYNLL1AS1 (NCBI Entrez Gene)
External Ids for NRAV Gene
- HGNC: 48588
- NCBI Entrez Gene: 100506668
- Ensembl: ENSG00000248008
- OMIM®: 616207
Previous HGNC Symbols for NRAV Gene
- DYNLL1-AS1
Summaries for NRAV Gene
GeneCards Summary for NRAV Gene
NRAV (Negative Regulator Of Antiviral Response) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for NRAV Gene
- HGNC (48588)
- NCBI Entrez Gene (100506668)
- Ensembl (ENSG00000248008)
- OMIM® (616207)
- Open Targets Platform(ENSG00000248008)
- Search for NRAV at DataMed
- Search for NRAV at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NRAV Gene
Genomics for NRAV Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for NRAV Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around NRAV on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for NRAV Gene
Latest Assembly
- chr12:120,481,118-120,496,010
- (GRCh38/hg38)
- Size:
- 14,893 bases
- Orientation:
- Minus strand
Previous Assembly
- chr12:120,928,141-120,933,749
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 5,609 bases
- Orientation:
- Minus strand
- chr12:120,928,131-120,933,743
- (GRCh37/hg19 by Ensembl)
- Size:
- 5,613 bases
- Orientation:
- Minus strand
Genomic View for NRAV Gene
Genes around NRAV on UCSC Golden Path with GeneCards custom track
NRAV in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 12q24.31 by HGNC
- 12q24.31 by Entrez Gene
- 12q24.31 by Ensembl
NRAV Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for NRAV Gene
Proteins for NRAV Gene
Post-translational modifications for NRAV Gene
No Post-translational modifications
No data available for DME Specific Peptides for NRAV Gene
Domains & Families for NRAV Gene
Gene Families for NRAV Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NRAV Gene
Function for NRAV Gene
Phenotypes From GWAS Catalog for NRAV Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRAV Gene
Localization for NRAV Gene
| Compartment | Confidence |
|---|---|
| extracellular | 1 |
| nucleus | 1 |
| endosome | 1 |
| cytosol | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NRAV Gene
Transcripts for NRAV Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for NRAV Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00001BB992_9606 | lncRNA | 1903 | 3 |
Ensembl: ENST00000500741 (view in UCSC) , LncBook: HSALNT0195966, HSALNT0195967, |
| URS000075A220_9606 | lncRNA | 1899 | 3 |
RefSeq: NR_038854, LncBook: HSALNT0195969, LNCipedia: NRAV:3, |
| URS0000EEBD4B_9606 | lncRNA | 4142 | 1 |
Ensembl: ENST00000669580 (view in UCSC) , |
| URS0000EEE584_9606 | lncRNA | 1214 | 1 |
Ensembl: ENST00000668253 (view in UCSC) , |
| URS00008B86B7_9606 | lncRNA | 2381 | 3 |
LncBook: HSALNT0195965, LNCipedia: NRAV:1, NONCODE: NONHSAT031176.2, |
NRAV in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for NRAV Gene
- 8 NCBI additional mRNA sequence :
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for NRAV Gene
- GeneLoc Exon Structure for
- NRAV
Expression for NRAV Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NRAV
Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRAV Gene
Orthologs for NRAV Gene
No data available for Orthologs for NRAV Gene
Paralogs for NRAV Gene
No data available for Paralogs for NRAV Gene
Variants for NRAV Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
Additional Variant Information for NRAV Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- NRAV
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NRAV Gene
Disorders for NRAV Gene
Additional Disease Information for NRAV
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for NRAV Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRAV Gene
Publications for NRAV Gene
- NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription. (PMID: 25525793) Ouyang J … Chen JL (Cell host & microbe 2014) 2 3
- Long Noncoding RNA NRAV Promotes Respiratory Syncytial Virus Replication by Targeting the MicroRNA miR-509-3p/Rab5c Axis To Regulate Vesicle Transportation. (PMID: 32102886) Li J … Wei L (Journal of virology 2020) 3
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
ExternalLinks
Products for NRAV Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for NRAV
- Origene Custom Protein Services for NRAV
- Browse OriGene Inhibitory RNA Products For NRAV
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for NRAV
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For NRAV
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for NRAV
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for NRAV
- Search GeneCopoeia for miRNA 3'UTR Target clone products for NRAV
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for NRAV
Sources for NRAV Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB