Free for academic non-profit institutions. Other users need a Commercial license

NRADDP Gene(Pseudogene)

Neurotrophin Receptor Associated Death Domain, Pseudogene

GCID:
GC03P047054
GIFtS:
15
Genes Participants
UDN Logo

Aliases for NRADDP Gene

Aliases for NRADDP Gene

  • Neurotrophin Receptor Associated Death Domain, Pseudogene 2 3 5
  • NRADD Pseudogene 3

External Ids for NRADDP Gene

Summaries for NRADDP Gene

Entrez Gene Summary for NRADDP Gene

  • The neurotrophin receptor alike death domain proteins belong to the death domain superfamily and are involved in mediating apoptosis. This gene has been inactivated by mutation and is nonfunctional in humans. [provided by RefSeq, Oct 2008]

GeneCards Summary for NRADDP Gene

NRADDP (Neurotrophin Receptor Associated Death Domain, Pseudogene) is a Pseudogene.

Additional gene information for NRADDP Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NRADDP Gene

Genomics for NRADDP Gene

GeneHancer (GH) Regulatory Elements for NRADDP Gene

Promoters and enhancers for NRADDP Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03J047008 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 600.7 -1.0 -1014 2.2 SP1 ZNF687 GLIS2 POLR2A PKNOX1 ZIC2 PATZ1 ZNF692 TRIM22 KLF9 NRADDP NBEAL2 CCDC12 KLHL18 KIF9
GH03J046984 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.7 -22677 7.6 SP1 CC2D1A ZFX CBFA2T2 ZNF148 MLLT1 GTF2F1 ZNF687 NFIB CDC5L SETD2 PTPN23 CCDC12 BOLA2P2 NBEAL2 SCAP SMARCC1 XCR1 PTH1R KLHL18
GH03J047016 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +7.2 7239 3.9 CBFA2T2 MLLT1 CEBPG TRIM24 SP7 SP1 ZNF639 EGR1 SMARCA4 DPF2 NBEAL2 PTH1R CCDC12 MYL3 PRSS50 PRSS45P NRADDP MRPL57P3 SETD2
GH03J046998 Enhancer 1 ENCODE dbSUPER 0.4 -12.1 -12098 0.2 HDGF CC2D1A CTCF CREM RAD21 ARID2 ZBTB33 ZNF600 ATF1 ZNF143 NRADDP CCDC12 NBEAL2
GH03J047022 Enhancer 0.8 Ensembl ENCODE 0.4 +12.1 12058 1.4 SP1 RXRA ZSCAN4 FOXA2 SCRT2 JUND NFIC HNF4A NFIA GLIS1 NBEAL2 CCDC12 PTH1R PTPN23 MRPL57P3 NRADDP SETD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NRADDP on UCSC Golden Path with GeneCards custom track

Genomic Locations for NRADDP Gene

Genomic Locations for NRADDP Gene
chr3:47,010,824-47,013,467
(GRCh38/hg38)
Size:
2,644 bases
Orientation:
Plus strand
chr3:47,053,032-47,054,957
(GRCh37/hg19)
Size:
1,926 bases
Orientation:
Plus strand

Genomic View for NRADDP Gene

Genes around NRADDP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NRADDP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NRADDP Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NRADDP Gene

Proteins for NRADDP Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NRADDP Gene

No Post-translational modifications

No data available for DME Specific Peptides for NRADDP Gene

Domains & Families for NRADDP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NRADDP Gene

Function for NRADDP Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for NRADDP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NRADDP Gene

Localization for NRADDP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NRADDP Gene

Pathways & Interactions for NRADDP Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
PathCards logo

SuperPathways for NRADDP Gene

No Data Available

Interacting Proteins for NRADDP Gene

Gene Ontology (GO) - Biological Process for NRADDP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NRADDP Gene

Drugs & Compounds for NRADDP Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for NRADDP Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for NRADDP Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for NRADDP Gene

Neurotrophin receptor associated death domain, pseudogene:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NRADDP Gene

No ASD Table

Relevant External Links for NRADDP Gene

GeneLoc Exon Structure for
NRADDP
ECgene alternative splicing isoforms for
NRADDP

Expression for NRADDP Gene

Products:

  1. Primer
  2. Gene Expression Assay
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NRADDP Gene

mRNA expression in normal human tissues for NRADDP Gene
mRNA expression by GTEx for NRADDP Gene

mRNA differential expression in normal tissues according to GTEx for NRADDP Gene

This gene is overexpressed in Whole Blood (x8.2), Skin - Not Sun Exposed (Suprapubic) (x5.3), and Esophagus - Mucosa (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of NRADDP Gene:

NRADDP

SOURCE GeneReport for Unigene cluster for NRADDP Gene:

Hs.201522
genes like me logo Genes that share expression patterns with NRADDP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NRADDP Gene

Orthologs for NRADDP Gene

Evolution for NRADDP Gene

ENSEMBL:
Gene Tree for NRADDP (if available)
TreeFam:
Gene Tree for NRADDP (if available)

No data available for Orthologs for NRADDP Gene

Paralogs for NRADDP Gene

No data available for Paralogs for NRADDP Gene

Variants for NRADDP Gene

Products:

  1. SNP Genotyping and Copy Number Assay
VarElect - NGS phenotyper. Rapid prioritization of variants from NGS data powered by 100+ GeneCards sources

Sequence variations from dbSNP and Humsavar for NRADDP Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs886058610 uncertain-significance, Gray platelet syndrome 47,009,564(+) C/G upstream_transcript_variant
rs886058611 uncertain-significance, Gray platelet syndrome 47,009,583(+) C/T upstream_transcript_variant
rs1000289162 -- 47,012,663(+) C/T non_coding_transcript_variant
rs1002004126 -- 47,009,578(+) T/C upstream_transcript_variant
rs1003497539 -- 47,013,877(+) A/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for NRADDP Gene

Variant ID Type Subtype PubMed ID
esv3596073 CNV loss 21293372
nsv428417 CNV loss 18775914
nsv954479 CNV deletion 24416366
nsv997261 CNV gain 25217958

Additional Variant Information for NRADDP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NRADDP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NRADDP Gene

Disorders for NRADDP Gene

Additional Disease Information for NRADDP

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for NRADDP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NRADDP Gene

Publications for NRADDP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 2 3 58
  2. Comparative genomics search for losses of long-established genes on the human lineage. (PMID: 18085818) Zhu J … Haussler D (PLoS computational biology 2007) 2 3 58
  3. NRADD, a novel membrane protein with a death domain involved in mediating apoptosis in response to ER stress. (PMID: 12728256) Wang X … Vincenz C (Cell death and differentiation 2003) 3 58
  4. PLAIDD, a type II death domain protein that interacts with p75 neurotrophin receptor. (PMID: 12095158) Frankowski H … Bredesen DE (Neuromolecular medicine 2002) 3 58

ExternalLinks

View latest publications for NRADDP gene in Mastermind

Products for NRADDP Gene

Sources for NRADDP Gene

Content
Loading form....