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Aliases for NR2F1-AS1 Gene

Subcategory (RNA class) for NR2F1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NR2F1-AS1 Gene

  • NR2F1 Antisense RNA 1 2 3 5

External Ids for NR2F1-AS1 Gene

Previous GeneCards Identifiers for NR2F1-AS1 Gene

  • GC05M092747

Summaries for NR2F1-AS1 Gene

GeneCards Summary for NR2F1-AS1 Gene

NR2F1-AS1 (NR2F1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NR2F1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NR2F1-AS1 Gene

Genomics for NR2F1-AS1 Gene

GeneHancer (GH) Regulatory Elements for NR2F1-AS1 Gene

Promoters and enhancers for NR2F1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I093576 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 29.2 +2.6 2569 13.1 MLX FEZF1 YY1 ZNF213 ZNF416 ZNF143 ZNF548 SP3 NFYC ZFP41 NR2F1 NPM1P27 NR2F1-AS1 FAM172A POU5F2 MIR2277 ENSG00000251023 PIR38533
GH05I093606 Enhancer 1.2 Ensembl ENCODE dbSUPER 13.3 -21.9 -21938 1.4 PKNOX1 FOXA2 MZF1 SIN3A FEZF1 ZNF2 RAD21 ZNF335 ZNF366 ZSCAN5C NR2F1 NR2F1-AS1 ENSG00000278905 MIR2277
GH05I093563 Enhancer 1 Ensembl ENCODE dbSUPER 12.6 +21.1 21060 2.3 ZNF362 JUN JUNB ZNF384 BATF ATF2 RELA JUND POLR2A ATF7 NR2F1-AS1 MIR2277 NR2F1 PIR38533
GH05I093357 Enhancer 1.1 Ensembl ENCODE 11.1 +226.3 226275 3.3 MZF1 FEZF1 RAD21 RFX5 ZNF335 ZNF366 ZSCAN5C SCRT2 RUNX3 YY2 FAM172A NR2F1-AS1 GC05P093406 POLD2P1
GH05I094469 Enhancer 0.9 ENCODE 11.6 -884.6 -884561 0.6 PKNOX1 FEZF1 ZNF2 BRCA1 ZNF121 GLIS2 ZNF213 KLF7 FOS SP3 NR2F1-AS1 FAM172A MTND5P12 KIAA0825 GC05P094313
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NR2F1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NR2F1-AS1 Gene

Genomic Locations for NR2F1-AS1 Gene
176,293 bases
Minus strand

Genomic View for NR2F1-AS1 Gene

Genes around NR2F1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NR2F1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NR2F1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NR2F1-AS1 Gene

Proteins for NR2F1-AS1 Gene

Post-translational modifications for NR2F1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NR2F1-AS1 Gene

Domains & Families for NR2F1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NR2F1-AS1 Gene

Function for NR2F1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NR2F1-AS1 Gene

Localization for NR2F1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NR2F1-AS1 Gene

Pathways & Interactions for NR2F1-AS1 Gene

SuperPathways for NR2F1-AS1 Gene

No Data Available

Interacting Proteins for NR2F1-AS1 Gene

Gene Ontology (GO) - Biological Process for NR2F1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NR2F1-AS1 Gene

Drugs & Compounds for NR2F1-AS1 Gene

No Compound Related Data Available

Transcripts for NR2F1-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for NR2F1-AS1 Gene

No ASD Table

Relevant External Links for NR2F1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NR2F1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NR2F1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NR2F1-AS1 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x4.4) and Brain - Anterior cingulate cortex (BA24) (x4.1).
genes like me logo Genes that share expression patterns with NR2F1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NR2F1-AS1 Gene

Orthologs for NR2F1-AS1 Gene

Evolution for NR2F1-AS1 Gene

Gene Tree for NR2F1-AS1 (if available)
Gene Tree for NR2F1-AS1 (if available)

No data available for Orthologs for NR2F1-AS1 Gene

Paralogs for NR2F1-AS1 Gene

No data available for Paralogs for NR2F1-AS1 Gene

Variants for NR2F1-AS1 Gene

Sequence variations from dbSNP and Humsavar for NR2F1-AS1 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000002005 -- 93,469,504(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000033369 -- 93,469,700(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000047708 -- 93,516,694(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000061679 -- 93,583,209(-) A/T upstream_transcript_variant
rs1000065108 -- 93,471,896(-) C/T genic_downstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for NR2F1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv830404 CNV loss 17160897
nsv830402 CNV gain 17160897
nsv4918 CNV deletion 18451855
nsv1074856 CNV deletion 25765185
dgv954n67 CNV gain 20364138

Additional Variant Information for NR2F1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NR2F1-AS1 Gene

Disorders for NR2F1-AS1 Gene

Additional Disease Information for NR2F1-AS1

No disorders were found for NR2F1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NR2F1-AS1 Gene

Publications for NR2F1-AS1 Gene

  1. Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo. (PMID: 23583100) Ramos AD … Lim DA (Cell stem cell 2013) 2 3 58
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for NR2F1-AS1 Gene

Sources for NR2F1-AS1 Gene

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