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Aliases for NPM1P6 Gene

Aliases for NPM1P6 Gene

  • Nucleophosmin 1 Pseudogene 6 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 6 3
  • NG6-4 3
  • NPMP6 3

External Ids for NPM1P6 Gene

Previous HGNC Symbols for NPM1P6 Gene

  • NPMP6

Previous GeneCards Identifiers for NPM1P6 Gene

  • GC00U990239
  • GC08U900216
  • GC08P062164
  • GC08P062278

Summaries for NPM1P6 Gene

GeneCards Summary for NPM1P6 Gene

NPM1P6 (Nucleophosmin 1 Pseudogene 6) is a Pseudogene.

Additional gene information for NPM1P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P6 Gene

Genomics for NPM1P6 Gene

GeneHancer (GH) Regulatory Elements for NPM1P6 Gene

Promoters and enhancers for NPM1P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J061706 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +509.4 509412 10.2 HDGF ZNF652 CC2D1A SP1 ELF3 CTCF ZFX MNT CBFA2T2 NKRF ASPH NPM1P6 MIR4470 GC08P061662
GH08J060515 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.2 -684.6 -684554 5.8 ZFX ELF3 MNT ZNF148 NKRF CEBPG CSDE1 ZNF384 ZNF687 ZNF24 RAB2A LINC01301 PIR33286 ENSG00000255321 NPM1P6
GH08J060619 Enhancer 1.3 UCNEbase ENCODE 12 -582.2 -582239 0.9 NFIB SP7 KLF14 CREM MZF1 RAD21 ZNF331 PKNOX1 ZNF221 ZBTB8A NPM1P6 CLVS1 GC08P060601 ENSG00000228862 RAB2A
GH08J061755 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.3 +557.6 557646 9.4 CC2D1A ELF3 ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 ZSCAN21 BACH1 MAFK ASPH NPM1P6 ENSG00000251127 MIR4470
GH08J060942 Enhancer 1 ENCODE dbSUPER 13.7 -257.7 -257723 3.5 ELF3 CEBPG SP1 ZNF644 KAT8 IKZF1 HMG20B RXRA CEBPA GATAD2A NPM1P6 CLVS1 ENSG00000255397 NASPP1 ENSG00000254777
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P6 Gene

Genomic Locations for NPM1P6 Gene
chr8:61,202,255-61,203,545
(GRCh38/hg38)
Size:
1,291 bases
Orientation:
Plus strand
chr8:62,114,814-62,116,104
(GRCh37/hg19)
Size:
1,291 bases
Orientation:
Plus strand

Genomic View for NPM1P6 Gene

Genes around NPM1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P6 Gene

Proteins for NPM1P6 Gene

Post-translational modifications for NPM1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P6 Gene

Domains & Families for NPM1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P6 Gene

Function for NPM1P6 Gene

Phenotypes From GWAS Catalog for NPM1P6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P6 Gene

Localization for NPM1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P6 Gene

Pathways & Interactions for NPM1P6 Gene

PathCards logo

SuperPathways for NPM1P6 Gene

No Data Available

Interacting Proteins for NPM1P6 Gene

Gene Ontology (GO) - Biological Process for NPM1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P6 Gene

Drugs & Compounds for NPM1P6 Gene

No Compound Related Data Available

Transcripts for NPM1P6 Gene

mRNA/cDNA for NPM1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P6 Gene

No ASD Table

Relevant External Links for NPM1P6 Gene

GeneLoc Exon Structure for
NPM1P6
ECgene alternative splicing isoforms for
NPM1P6

Expression for NPM1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P6 Gene:

NPM1P6
genes like me logo Genes that share expression patterns with NPM1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P6 Gene

Orthologs for NPM1P6 Gene

Evolution for NPM1P6 Gene

ENSEMBL:
Gene Tree for NPM1P6 (if available)
TreeFam:
Gene Tree for NPM1P6 (if available)

No data available for Orthologs for NPM1P6 Gene

Paralogs for NPM1P6 Gene

No data available for Paralogs for NPM1P6 Gene

Variants for NPM1P6 Gene

Additional Variant Information for NPM1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P6 Gene

Disorders for NPM1P6 Gene

Additional Disease Information for NPM1P6

Genetic Association Database
(GAD)

No disorders were found for NPM1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P6 Gene

Publications for NPM1P6 Gene

  1. Characterization of seven processed pseudogenes of nucleophosmin/B23 in the human genome. (PMID: 8471164) Liu QR … Chan PK (DNA and cell biology 1993) 2 3 58
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 45 58

Products for NPM1P6 Gene

Sources for NPM1P6 Gene

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