Aliases for NPM1P29 Gene

Aliases for NPM1P29 Gene

  • Nucleophosmin 1 Pseudogene 29 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 29 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 3

External Ids for NPM1P29 Gene

Previous GeneCards Identifiers for NPM1P29 Gene

  • GC03M149658

Summaries for NPM1P29 Gene

GeneCards Summary for NPM1P29 Gene

NPM1P29 (Nucleophosmin 1 Pseudogene 29) is a Pseudogene.

Additional gene information for NPM1P29 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NPM1P29 Gene

Genomics for NPM1P29 Gene

GeneHancer (GH) Regulatory Elements for NPM1P29 Gene

Promoters and enhancers for NPM1P29 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J149938 Enhancer 0.6 FANTOM5 Ensembl 500.7 +0.4 361 1.1 CREB1 ZNF513 RXRA NPM1P29 TSC22D2 RNF13 piR-48820-071 ANKUB1 lnc-ANKUB1-2
GH03J150406 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 5.2 -471.5 -471476 9.7 HNRNPK ZNF217 EP300 CTCF SIN3A NRF1 POLR2G USF1 NCOR1 GTF2E2 TSC22D2 lnc-SERP1-4 WWTR1-IT1 COMMD2 EIF2A WWTR1 NPM1P29 lnc-TSC22D2-3 HSALNG0029785
GH03J150446 Enhancer 0.9 ENCODE 5.2 -509.6 -509624 6.8 ZNF217 GTF2E2 JUND FOS ZBTB5 ZBTB11 AFF1 RFX1 HES1 MYC EIF2A NPM1P29 HSALNG0029785 lnc-SERP1-4 TSC22D2
GH03J150442 Enhancer 0.7 Ensembl ENCODE 5.1 -503.6 -503608 2.6 FOS ZNF316 CEBPB NFE2 EP300 GATA3 NFE2L2 ZNF184 TSC22D2 NPM1P29 HSALNG0029785 lnc-SERP1-4
GH03J149936 Enhancer 0.8 Ensembl ENCODE 0.7 +3.4 3408 1.8 CTCF TEAD4 ZBTB10 REST RAD21 TRIM22 SMC3 HDAC2 DEK YY1 NPM1P29 piR-48820-071 ANKUB1 lnc-ANKUB1-2 RNF13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P29 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P29 Gene

Genomic Locations for NPM1P29 Gene
chr3:149,938,793-149,939,893
(GRCh38/hg38)
Size:
1,101 bases
Orientation:
Minus strand
chr3:149,656,780-149,657,586
(GRCh37/hg19)
Size:
807 bases
Orientation:
Minus strand

Genomic View for NPM1P29 Gene

Genes around NPM1P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P29 Gene

Proteins for NPM1P29 Gene

Post-translational modifications for NPM1P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P29 Gene

Domains & Families for NPM1P29 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NPM1P29 Gene

Function for NPM1P29 Gene

Phenotypes From GWAS Catalog for NPM1P29 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P29 Gene

Localization for NPM1P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P29 Gene

Pathways & Interactions for NPM1P29 Gene

PathCards logo

SuperPathways for NPM1P29 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for NPM1P29 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NPM1P29 Gene

Drugs & Compounds for NPM1P29 Gene

No Compound Related Data Available

Transcripts for NPM1P29 Gene

mRNA/cDNA for NPM1P29 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P29 Gene

No ASD Table

Relevant External Links for NPM1P29 Gene

GeneLoc Exon Structure for
NPM1P29

Expression for NPM1P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NPM1P29 Gene

mRNA differential expression in normal tissues according to GTEx for NPM1P29 Gene

This gene is overexpressed in Testis (x5.4) and Whole Blood (x4.6).
genes like me logo Genes that share expression patterns with NPM1P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P29 Gene

Orthologs for NPM1P29 Gene

Evolution for NPM1P29 Gene

ENSEMBL:
Gene Tree for NPM1P29 (if available)
TreeFam:
Gene Tree for NPM1P29 (if available)

No data available for Orthologs for NPM1P29 Gene

Paralogs for NPM1P29 Gene

No data available for Paralogs for NPM1P29 Gene

Variants for NPM1P29 Gene

Additional Variant Information for NPM1P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P29 Gene

Disorders for NPM1P29 Gene

No disorders were found for NPM1P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPM1P29 Gene

Publications for NPM1P29 Gene

No publications were found for NPM1P29 Gene.

No data available for Mastermind for NPM1P29 Gene

Products for NPM1P29 Gene

Sources for NPM1P29 Gene